RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 CLSPNQ9HAW4 1339 aa6.17□□□□□ -1.42
ATXN3-218ENST00000553309 MON2Q7Z3U7 1717 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 AFDNP55196 1824 aaKnown RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 TRPM7Q96QT4 1865 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 HAUS5O94927 633 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 AGFG2O95081 481 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 BLOC1S1P78537 153 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 DSC2Q02487 901 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 COL10A1Q03692 680 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 TLE1Q04724 770 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 NOGQ13253 232 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 CYP2A13Q16696 494 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 KHDC1Q4VXA5 237 aaKnown RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 LINC00476Q8WZB0 136 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 COQ10AQ96MF6 247 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 VRK1Q99986 396 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 RNF186Q9NXI6 227 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 KCNE5Q9UJ90 142 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 CFAP20Q9Y6A4 193 aaKnown RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 MYH14Q7Z406 1995 aaKnown RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 CGNL1Q0VF96 1302 aa6.16□□□□□ -1.42
ATXN3-218ENST00000553309 COL11A2P13942 1736 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 COL5A3P25940 1745 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-218ENST00000553309 CEP290O15078 2479 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 ZRANB2O95218 330 aaKnown RBP eCLIP6.15□□□□□ -1.42
ATXN3-218ENST00000553309 SERPINB2P05120 415 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 FCER1AP12319 257 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 TGM1P22735 817 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 EPS15P42566 896 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 CRKLP46109 303 aaKnown RBP6.15□□□□□ -1.42
ATXN3-218ENST00000553309 SLFN5Q08AF3 891 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 SCAPQ12770 1279 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 FOXI1Q12951 378 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 NSUN6Q8TEA1 469 aaKnown RBP6.15□□□□□ -1.42
ATXN3-218ENST00000553309 Q96MF0 132 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 MED15Q96RN5 788 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 PACSIN1Q9BY11 444 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 GLIS2Q9BZE0 524 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-218ENST00000553309 MAN1C1Q9NR34 630 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 TBCCD1Q9NVR7 557 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 JKAMPQ9P055 326 aa6.15□□□□□ -1.42
ATXN3-218ENST00000553309 EVC2Q86UK5 1308 aa6.15□□□□□ -1.43
ATXN3-218ENST00000553309 SMG6Q86US8 1419 aaKnown RBP6.15□□□□□ -1.43
ATXN3-218ENST00000553309 MYADML2A6NDP7 307 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 H0YGN5 161 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 SLC43A1O75387 559 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 PDCP20941 246 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 MALP21145 153 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 BMP5P22003 454 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 SEC24CP53992 1094 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 SNAPC2Q13487 334 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 RRS1Q15050 365 aaKnown RBP6.14□□□□□ -1.43
ATXN3-218ENST00000553309 FLYWCH1Q4VC44 716 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 OLFML1Q6UWY5 402 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 OLFM4Q6UX06 510 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 FUBP1Q96AE4 644 aaKnown RBP6.14□□□□□ -1.43
ATXN3-218ENST00000553309 SAGE1Q9NXZ1 904 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 HDAC9Q9UKV0 1011 aa6.14□□□□□ -1.43
ATXN3-218ENST00000553309 MKI67P46013 3256 aaKnown RBP6.14□□□□□ -1.43
ATXN3-218ENST00000553309 NRXN2Q9P2S2 1712 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 CACNA1SQ13698 1873 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 COL6A3P12111 3177 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 ESRRBO95718 433 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 LMNAP02545 664 aaKnown RBP6.13□□□□□ -1.43
ATXN3-218ENST00000553309 CD1AP06126 327 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 SMARCA1P28370 1054 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 MPLP40238 635 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 HUNKP57058 714 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 ANAPC15P60006 121 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 EXOSC10Q01780 885 aaKnown RBP6.13□□□□□ -1.43
ATXN3-218ENST00000553309 DLK2Q6UY11 383 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 ZBTB46Q86UZ6 589 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 COLGALT2Q8IYK4 626 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 CPA6Q8N4T0 437 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 Q8NA96 180 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 PTCD3Q96EY7 689 aaKnown RBP6.13□□□□□ -1.43
ATXN3-218ENST00000553309 TLR10Q9BXR5 811 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 UNKLQ9H9P5 680 aaKnown RBP6.13□□□□□ -1.43
ATXN3-218ENST00000553309 CASS4Q9NQ75 786 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 ZNHIT2Q9UHR6 403 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 SLC45A2Q9UMX9 530 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 LUC7L2Q9Y383 392 aaKnown RBP6.13□□□□□ -1.43
ATXN3-218ENST00000553309 SLX4Q8IY92 1834 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 ANKRD31Q8N7Z5 1873 aa6.13□□□□□ -1.43
ATXN3-218ENST00000553309 OVOL3O00110 214 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 MAST3O60307 1309 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 ZFPL1O95159 310 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 FDXRP22570 491 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 VAV2P52735 878 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 GEN1Q17RS7 908 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 GPC2Q8N158 579 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 SLC44A3Q8N4M1 653 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 AOPEPQ8N6M6 819 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 C3orf20Q8ND61 904 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 IMPG2Q9BZV3 1241 aa6.12□□□□□ -1.43
ATXN3-218ENST00000553309 INSRP06213 1382 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms