RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TNFRSF10AO00220 468 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 DPYSL4O14531 572 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 AP1G2O75843 785 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 NOL4O94818 638 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 IL9P15248 144 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 NPR3P17342 541 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 CYP2F1P24903 491 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 YWHAQP27348 245 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 AVPR1AP37288 418 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 PSMC1P62191 440 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 RBM10P98175 930 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 PTK2Q05397 1052 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 MTMR3Q13615 1198 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 CNGA2Q16280 664 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 ZSCAN23Q3MJ62 389 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 SPOPLQ6IQ16 392 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 PPP1R2P3Q6NXS1 205 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 TMEM270Q6UE05 265 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 OSTM1Q86WC4 334 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 DDX42Q86XP3 938 aaKnown RBP eCLIP10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 AOPEPQ8N6M6 819 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 ANKRD52Q8NB46 1076 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 MSANTD4Q8NCY6 345 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 TTLL2Q9BWV7 592 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 APOL5Q9BWW9 433 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 DUSP16Q9BY84 665 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 TASP1Q9H6P5 420 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 TRPV4Q9HBA0 871 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 ZFP14Q9HCL3 533 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 CSNK1G1Q9HCP0 422 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 UBE2TQ9NPD8 197 aaPredicted RBP10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 CRTAC1Q9NQ79 661 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 SAMSN1Q9NSI8 373 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 THG1LQ9NWX6 298 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 CEP72Q9P209 647 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 DNMT3BQ9UBC3 853 aaKnown RBP10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 CNTN6Q9UQ52 1028 aa10.88□□□□□ -0.67
TRAFD1-208ENST00000552890 BDP1A6H8Y1 2624 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 LGALS16A8MUM7 142 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 ECI2O75521 394 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 SERPINC1P01008 464 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 MYL4P12829 197 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 CD19P15391 556 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 ZNF18P17022 549 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 PON1P27169 355 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 ACADSBP45954 432 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 TUBP50607 506 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 AMPD2Q01433 879 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 GOLGA8DPQ0D2H9 430 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 TDGQ13569 410 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 KRT31Q15323 416 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 NFKBIBQ15653 356 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 GET4Q7L5D6 327 aaPredicted RBP10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 FAM35AQ86V20 835 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 NEK11Q8NG66 645 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 LMO3Q8TAP4 145 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 SLC2A14Q8TDB8 520 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 DEPDC1BQ8WUY9 529 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 GOLGA1Q92805 767 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 FGF13Q92913 245 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 SMARCD2Q92925 531 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 TATDN2Q93075 761 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 PCMTD1Q96MG8 357 aaPredicted RBP10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 TMEM209Q96SK2 561 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 C1QTNF1Q9BXJ1 281 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 B3GNT5Q9BYG0 378 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 STK33Q9BYT3 514 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 EDEM3Q9BZQ6 932 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 NUCKS1Q9H1E3 243 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 ATXN3LQ9H3M9 355 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 CYLDQ9NQC7 956 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 TLR8Q9NR97 1041 aaKnown RBP10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 MYO6Q9UM54 1294 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 PLXNA3P51805 1871 aa10.87□□□□□ -0.67
TRAFD1-208ENST00000552890 TSC2P49815 1807 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 SLC38A8A6NNN8 435 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 F8VP50 259 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 CBFA2T2O43439 604 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 DCXO43602 365 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 FBXO21O94952 628 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 USP17L7P0C7H9 530 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 KRT5P13647 590 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 GABRR2P28476 465 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 RAP1GAPP47736 663 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 COPB1P53618 953 aaKnown RBP10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 RAD23BP54727 409 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 UBXN1Q04323 297 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 LRMPQ12912 555 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 ZNF268Q14587 947 aaPredicted RBP10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 DDR2Q16832 855 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 LRSAM1Q6UWE0 723 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 LCLAT1Q6UWP7 414 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 C11orf57Q6ZUT1 292 aaPredicted RBP10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 MON1AQ86VX9 555 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 ZNF677Q86XU0 584 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 FUKQ8N0W3 1084 aa10.86□□□□□ -0.67
TRAFD1-208ENST00000552890 SLC4A11Q8NBS3 891 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms