RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 CORO1BQ9BR76 489 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 TUBGCP2Q9BSJ2 902 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 TMEM8AQ9HCN3 771 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 AGAP1Q9UPQ3 857 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ZFHX4Q86UP3 3567 aa12.18□□□□□ -0.46
TMEM116-218ENST00000552839 ANK1P16157 1881 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 WDR27A2RRH5 827 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 CHURC1-FNTBB4DL54 471 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 ABLIM3O94929 683 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 GDI1P31150 447 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 CXCL12P48061 93 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 FNTBP49356 437 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 TAF6P49848 677 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 TNNC1P63316 161 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 DLG4P78352 724 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 SRSF5Q13243 272 aaKnown RBP12.17□□□□□ -0.46
TMEM116-218ENST00000552839 SIM2Q14190 667 aaPredicted RBP12.17□□□□□ -0.46
TMEM116-218ENST00000552839 CSRP2Q16527 193 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 UPP1Q16831 310 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 ZNF699Q32M78 642 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 XKR4Q5GH76 650 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 SLC8B1Q6J4K2 584 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 ALKAL1Q6UXT8 129 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 C3orf58Q8NDZ4 430 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 OR5B17Q8NGF7 314 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 IRF7Q92985 503 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 ZSWIM3Q96MP5 696 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 TRPV5Q9NQA5 729 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 PIAS3Q9Y6X2 628 aa12.17□□□□□ -0.46
TMEM116-218ENST00000552839 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
TMEM116-218ENST00000552839 NCANO14594 1321 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 PRRG1O14668 218 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 ZNF197O14709 1029 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 CBFA2T2O43439 604 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 MICAL2O94851 1124 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 SEC24AO95486 1093 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 ATF2P15336 505 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 PSMC3P17980 439 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
TMEM116-218ENST00000552839 KCNA4P22459 653 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 ELF1P32519 619 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 FMO5P49326 533 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 MARSP56192 900 aaKnown RBP12.16□□□□□ -0.46
TMEM116-218ENST00000552839 WNT7BP56706 349 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 NCOA4Q13772 614 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 KRT31Q15323 416 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 ZNF667Q5HYK9 610 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 CDKAL1Q5VV42 579 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 C9orf57Q5W0N0 161 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 TRIM59Q8IWR1 403 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 HS6ST3Q8IZP7 471 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 C1orf127Q8N9H9 656 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 FBXL13Q8NEE6 735 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 SLC35C1Q96A29 364 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 FAM84AQ96KN4 292 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 DNAI2Q9GZS0 605 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 VPS16Q9H269 839 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 CYP4F11Q9HBI6 524 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 GCNT4Q9P109 453 aa12.16□□□□□ -0.46
TMEM116-218ENST00000552839 SPAG17Q6Q759 2223 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 SDK1Q7Z5N4 2213 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 PTPRJQ12913 1337 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 K7ESF4 209 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 P4HA2O15460 535 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 HUS1O60921 280 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 MOSPD3O75425 235 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 HLA-DRAP01903 254 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 ODC1P11926 461 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 PAX3P23760 479 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 LRPAP1P30533 357 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 VIPR2P41587 438 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 COPB1P53618 953 aaKnown RBP12.15□□□□□ -0.46
TMEM116-218ENST00000552839 ARPP19P56211 112 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 SOX4Q06945 474 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-218ENST00000552839 PPP3CAQ08209 521 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 IQCB1Q15051 598 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 ZACNQ401N2 412 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 VWA3BQ502W6 1294 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 TDRD10Q5VZ19 366 aaKnown RBP12.15□□□□□ -0.46
TMEM116-218ENST00000552839 GBP6Q6ZN66 633 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 PDZD4Q76G19 769 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-218ENST00000552839 SV2AQ7L0J3 742 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.15□□□□□ -0.46
TMEM116-218ENST00000552839 METTL23Q86XA0 190 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 TCEAL8Q8IYN2 117 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 SPEM1Q8N4L4 309 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 LRRC52Q8N7C0 313 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 PLEKHO2Q8TD55 490 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 SMARCD2Q92925 531 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 HPDLQ96IR7 371 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 MED15Q96RN5 788 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 MMS19Q96T76 1030 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 NDST4Q9H3R1 872 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.15□□□□□ -0.46
TMEM116-218ENST00000552839 RBM12Q9NTZ6 932 aaKnown RBP12.15□□□□□ -0.46
TMEM116-218ENST00000552839 RALYQ9UKM9 306 aaKnown RBP12.15□□□□□ -0.46
TMEM116-218ENST00000552839 ANGPTL2Q9UKU9 493 aa12.15□□□□□ -0.46
TMEM116-218ENST00000552839 INSL5Q9Y5Q6 135 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms