RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 RAD54LQ92698 747 aa18.14■□□□□ 0.49
CACNB3-222ENST00000552465 IKZF4Q9H2S9 585 aa18.14■□□□□ 0.49
CACNB3-222ENST00000552465 ARHGAP26Q9UNA1 814 aa18.14■□□□□ 0.49
CACNB3-222ENST00000552465 DENND4CQ5VZ89 1909 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 WNT7BP56706 349 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 TFAMQ00059 246 aaKnown RBP18.13■□□□□ 0.49
CACNB3-222ENST00000552465 LMAN2Q12907 356 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 KCNB1Q14721 858 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 POSTNQ15063 836 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 CCDC142Q17RM4 750 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 GAB4Q2WGN9 574 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 CFAP221Q4G0U5 840 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 TRIM61Q5EBN2 209 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 TMEM92Q6UXU6 159 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 ZNF720Q7Z2F6 126 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 OSTM1Q86WC4 334 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 SPATA2LQ8IUW3 424 aaPredicted RBP18.13■□□□□ 0.49
CACNB3-222ENST00000552465 SCN4BQ8IWT1 228 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 POMGNT1Q8WZA1 660 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 FRYQ5TBA9 3013 aa18.13■□□□□ 0.49
CACNB3-222ENST00000552465 ALDH1A2O94788 518 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 ITGB3P05106 788 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 HNRNPLP14866 589 aaKnown RBP eCLIP18.12■□□□□ 0.49
CACNB3-222ENST00000552465 PLCG1P19174 1290 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 MRPS21P82921 87 aaKnown RBP18.12■□□□□ 0.49
CACNB3-222ENST00000552465 ZXDBP98169 803 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 SCARA3Q6AZY7 606 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 LPCAT2Q7L5N7 544 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 TTC30AQ86WT1 665 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 ABCA7Q8IZY2 2146 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 C1orf127Q8N9H9 656 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 RLN3Q8WXF3 142 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 ZCCHC14Q8WYQ9 949 aaKnown RBP18.12■□□□□ 0.49
CACNB3-222ENST00000552465 FUBP3Q96I24 572 aaKnown RBP eCLIP18.12■□□□□ 0.49
CACNB3-222ENST00000552465 SLC32A1Q9H598 525 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 GDAP2Q9NXN4 497 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 NEUROG3Q9Y4Z2 214 aa18.12■□□□□ 0.49
CACNB3-222ENST00000552465 TULP1O00294 542 aaPredicted RBP18.11■□□□□ 0.49
CACNB3-222ENST00000552465 TNFRSF10BO14763 440 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 GABRDO14764 452 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 MAP3K13O43283 966 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 HCRTO43612 131 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 P2RY2P41231 377 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 MAGEA11P43364 429 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 LHX1P48742 406 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 PDE6CP51160 858 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 KIAA1211LQ6NV74 962 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 FAM171BQ6P995 826 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 LRSAM1Q6UWE0 723 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 SYT12Q8IV01 421 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 CSGALNACT2Q8N6G5 542 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 LRRC52Q8N7C0 313 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 CXorf38Q8TB03 319 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 SPATA18Q8TC71 538 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 CACTINQ8WUQ7 758 aaKnown RBP18.11■□□□□ 0.49
CACNB3-222ENST00000552465 FNBP1Q96RU3 617 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 FAM213AQ9BRX8 229 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 NUSAP1Q9BXS6 441 aaKnown RBP18.11■□□□□ 0.49
CACNB3-222ENST00000552465 TMEM74BQ9NUR3 256 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 KIF3AQ9Y496 699 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 ATRXP46100 2492 aa18.11■□□□□ 0.49
CACNB3-222ENST00000552465 BAHCC1Q9P281 2608 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 ZNF638Q14966 1978 aaKnown RBP18.1■□□□□ 0.49
CACNB3-222ENST00000552465 OBSL1O75147 1896 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 MYMKA6NI61 221 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 LEFTY2O00292 366 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 HYAL3O43820 417 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-222ENST00000552465 CHRM1P11229 460 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-222ENST00000552465 PFKLP17858 780 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 PCSK1P29120 753 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 DDIT3P35638 169 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 PTGER3P43115 390 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 MAPK8P45983 427 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 ACAP1Q15027 740 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 BRSK2Q8IWQ3 736 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 TMEFF1Q8IYR6 380 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 ADGRF2Q8IZF7 708 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 ADGRG2Q8IZP9 1017 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 ALLCQ8N6M5 410 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 TOP6BLQ8N6T0 577 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 FRMD1Q8N878 549 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 KRI1Q8N9T8 703 aaKnown RBP18.1■□□□□ 0.49
CACNB3-222ENST00000552465 TXNDC5Q8NBS9 432 aaKnown RBP18.1■□□□□ 0.49
CACNB3-222ENST00000552465 ZSWIM2Q8NEG5 633 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 LARP4BQ92615 738 aaKnown RBP18.1■□□□□ 0.49
CACNB3-222ENST00000552465 HVCN1Q96D96 273 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 KIF2CQ99661 725 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 STRA6Q9BX79 667 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 MBD1Q9UIS9 605 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-222ENST00000552465 MSRB2Q9Y3D2 182 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 SNX9Q9Y5X1 595 aa18.1■□□□□ 0.49
CACNB3-222ENST00000552465 ATP2C2O75185 946 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 PPP1R37O75864 691 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 KLF8O95600 359 aaPredicted RBP18.09■□□□□ 0.49
CACNB3-222ENST00000552465 CYP17A1P05093 508 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 ENGP17813 658 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 SLC6A11P48066 632 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 RBP5P82980 135 aa18.09■□□□□ 0.49
CACNB3-222ENST00000552465 RING1Q06587 406 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms