RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 JADE1Q6IE81 842 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 SKAP1Q86WV1 359 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 ALLCQ8N6M5 410 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 TXNDC5Q8NBS9 432 aaKnown RBP16.47■□□□□ 0.23
CACNB3-220ENST00000551716 SPATA18Q8TC71 538 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 KCNN1Q92952 543 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 FAM212AQ96EL1 285 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 LRIG1Q96JA1 1093 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 YTHDC1Q96MU7 727 aaKnown RBP16.47■□□□□ 0.23
CACNB3-220ENST00000551716 PNKPQ96T60 521 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 CCSER1Q9C0I3 900 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 HAPLN2Q9GZV7 340 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 KCND2Q9NZV8 630 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 LARSQ9P2J5 1176 aaKnown RBP16.47■□□□□ 0.23
CACNB3-220ENST00000551716 DKK4Q9UBT3 224 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 ARHGAP26Q9UNA1 814 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 GON4LQ3T8J9 2241 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 ACACAQ13085 2346 aa16.47■□□□□ 0.23
CACNB3-220ENST00000551716 SLC9A3R1O14745 358 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-220ENST00000551716 ZBTB24O43167 697 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-220ENST00000551716 KLF8O95600 359 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-220ENST00000551716 APODP05090 189 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 FTH1P19P0C7X4 201 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 CDC25AP30304 524 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 TNFRSF4P43489 277 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 TRAPPC10P48553 1259 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 CDR1P51861 262 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 RPL6Q02878 288 aaKnown RBP16.46■□□□□ 0.23
CACNB3-220ENST00000551716 WSCD1Q658N2 575 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 IGSF22Q8N9C0 903 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 IL17RCQ8NAC3 791 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 LEO1Q8WVC0 666 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-220ENST00000551716 HMGB4Q8WW32 186 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 PI4K2AQ9BTU6 479 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 ASB7Q9H672 318 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 GCNT4Q9P109 453 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 KIAA1522Q9P206 1035 aaPredicted RBP16.46■□□□□ 0.23
CACNB3-220ENST00000551716 RAXQ9Y2V3 346 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 C2CD2Q9Y426 696 aa16.46■□□□□ 0.23
CACNB3-220ENST00000551716 LOC400499M0QZD8 3231 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 A0A1W2PQD8 194 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 SGK1O00141 431 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 HNRNPDLO14979 420 aaKnown RBP16.45■□□□□ 0.22
CACNB3-220ENST00000551716 SH3BP5O60239 455 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 ZIC2O95409 532 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-220ENST00000551716 GRIA2P42262 883 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 ZNF33AQ06730 810 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 TTC38Q5R3I4 469 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 TRMT11Q7Z4G4 463 aaKnown RBP16.45■□□□□ 0.22
CACNB3-220ENST00000551716 ADGRG2Q8IZP9 1017 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 FRMD1Q8N878 549 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 ARL14EPQ8N8R7 260 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-220ENST00000551716 GTF3C6Q969F1 213 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 BBC3Q96PG8 261 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-220ENST00000551716 SLC22A12Q96S37 553 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 FOXP1Q9H334 677 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-220ENST00000551716 FAM124BQ9H5Z6 455 aaPredicted RBP16.45■□□□□ 0.22
CACNB3-220ENST00000551716 CACNA2D2Q9NY47 1150 aa16.45■□□□□ 0.22
CACNB3-220ENST00000551716 ATXN2Q99700 1313 aaKnown RBP16.45■□□□□ 0.22
CACNB3-220ENST00000551716 TCRBV21S2A2A0A5A6 115 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 KPNA7A9QM74 516 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-220ENST00000551716 TK2O00142 265 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 FAM189A1O60320 539 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 KAT7O95251 611 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 NFICP08651 508 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 HNRNPLP14866 589 aaKnown RBP eCLIP16.44■□□□□ 0.22
CACNB3-220ENST00000551716 TIE1P35590 1138 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 POU5F1Q01860 360 aaKnown RBP16.44■□□□□ 0.22
CACNB3-220ENST00000551716 DDR2Q16832 855 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 SV2CQ496J9 727 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 PREPLQ4J6C6 727 aaPredicted RBP16.44■□□□□ 0.22
CACNB3-220ENST00000551716 NUDT18Q6ZVK8 323 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 GLRX5Q86SX6 157 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 C4orf32Q8N8J7 132 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 NECAB1Q8N987 351 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
CACNB3-220ENST00000551716 ACBD6Q9BR61 282 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 MSTO1Q9BUK6 570 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 ZDHHC5Q9C0B5 715 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 DPP3Q9NY33 737 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 SUSD2Q9UGT4 822 aa16.44■□□□□ 0.22
CACNB3-220ENST00000551716 CPSF3Q9UKF6 684 aaKnown RBP16.44■□□□□ 0.22
CACNB3-220ENST00000551716 NOL7Q9UMY1 257 aaKnown RBP16.44■□□□□ 0.22
CACNB3-220ENST00000551716 PI4KAP42356 2102 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 A0A0B4J269 797 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 ZNF217O75362 1048 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 TADA3O75528 432 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 PIGRP01833 764 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 GNSP15586 552 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 ABCD1P33897 745 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 PNPLA4P41247 253 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 GPR15P49685 360 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 FOSBP53539 338 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 SYCP2LQ5T4T6 812 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 TOGARAM2Q6ZUX3 1019 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 NAXDQ8IW45 347 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 PNPLA1Q8N8W4 532 aa16.43■□□□□ 0.22
CACNB3-220ENST00000551716 MDM1Q8TC05 714 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms