RNA–Protein interactions for RNA: ENST00000551260.5

RACGAP1-223, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-223	ENST00000551260	ZCCHC2	Q9C0B9	1178 aa	Known RBP	6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ATXN3L	Q9H3M9	355 aa		6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	UNC45A	Q9H3U1	944 aa		6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	RIC8A	Q9NPQ8	531 aa		6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	OBP2A	Q9NY56	170 aa		6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	FBXL5	Q9UKA1	691 aa		6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	MMP17	Q9ULZ9	603 aa		6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	YIPF1	Q9Y548	306 aa		6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TLN1	Q9Y490	2541 aa	Known RBP	6.51	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ARID1B	Q8NFD5	2236 aa	Predicted RBP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TDRD6	O60522	2096 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	FAM181B	A6NEQ2	426 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	INO80B-WBP1	J3KQ70	363 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260		K7EQS6	105 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TBX3	O15119	743 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	AP5Z1	O43299	807 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SOAT2	O75908	522 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	B3GAT3	O94766	335 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	FOS	P01100	380 aa	Predicted RBP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TH	P07101	528 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	MX2	P20592	715 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	GABRR2	P28476	465 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	AXL	P30530	894 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	HOXD12	P35452	270 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ADCY7	P51828	1080 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	CDR1	P51861	262 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	NAPA	P54920	295 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ANTXR2	P58335	489 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	XKR3	Q5GH77	459 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	GLRA4	Q5JXX5	417 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	LYPD4	Q6UWN0	246 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	CWC27	Q6UX04	472 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	NLRP8	Q86W28	1048 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ANKMY2	Q8IV38	441 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	HMGB4	Q8WW32	186 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	PSPC1	Q8WXF1	523 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	CD101	Q93033	1021 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	LENG9	Q96B70	501 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	CCDC51	Q96ER9	411 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ABHD17A	Q96GS6	310 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	HSPA12B	Q96MM6	686 aa		6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	THG1L	Q9NWX6	298 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	BCCIP	Q9P287	314 aa	Known RBP eCLIP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	HEMK1	Q9Y5R4	338 aa	Predicted RBP	6.5	□□□□□ -1.37
RACGAP1-223	ENST00000551260	LRRK1	Q38SD2	2015 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ERICH2	A1L162	156 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SERTM1	A2A2V5	107 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260		E9PAM4	449 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SGK1	O00141	431 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	MSH4	O15457	936 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	BRINP1	O60477	761 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	RECQL4	O94761	1208 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	KLF8	O95600	359 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	CYP3A4	P08684	503 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	OR4Q2	P0C623	313 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SMARCA1	P28370	1054 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	DPP6	P42658	865 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	PSMA6	P60900	246 aa	Known RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	MBTD1	Q05BQ5	628 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SOX4	Q06945	474 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	PREPL	Q4J6C6	727 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	CTXN3	Q4LDR2	81 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ARSJ	Q5FYB0	599 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SPDYC	Q5MJ68	293 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	EMC10	Q5UCC4	262 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	KIAA1614	Q5VZ46	1190 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TPGS2	Q68CL5	300 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SLC27A1	Q6PCB7	646 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	MIER3	Q7Z3K6	550 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	FERMT3	Q86UX7	667 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ERICH1	Q86X53	443 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	HACE1	Q8IYU2	909 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	RGL4	Q8IZJ4	473 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SVOP	Q8N4V2	548 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ALLC	Q8N6M5	410 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TTC9B	Q8N6N2	239 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TRIML1	Q8N9V2	468 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TXNDC5	Q8NBS9	432 aa	Known RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	IGDCC4	Q8TDY8	1250 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	FGF11	Q92914	225 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	RILPL2	Q969X0	211 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ERLEC1	Q96DZ1	483 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TBC1D32	Q96NH3	1257 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	PGLYRP2	Q96PD5	576 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	LPIN3	Q9BQK8	851 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	PI4K2A	Q9BTU6	479 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	SLC46A2	Q9BY10	475 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TASP1	Q9H6P5	420 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	GAREM1	Q9H706	876 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	CD93	Q9NPY3	652 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TM7SF3	Q9NS93	570 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	AFF4	Q9UHB7	1163 aa	Known RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	TPCN1	Q9ULQ1	816 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	ZNF232	Q9UNY5	417 aa		6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260	RBM19	Q9Y4C8	960 aa	Known RBP	6.49	□□□□□ -1.37
RACGAP1-223	ENST00000551260		A0A1W2PQD8	194 aa		6.48	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms