RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 TTC8Q8TAM2 541 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 TATDN2Q93075 761 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 CYP2S1Q96SQ9 504 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 KCNK16Q96T55 309 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 TRMT61BQ9BVS5 477 aaKnown RBP10.43□□□□□ -0.74
HDAC7-229ENST00000549883 BCO2Q9BYV7 579 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 TASP1Q9H6P5 420 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 BRD9Q9H8M2 597 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 TRPV4Q9HBA0 871 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 CACNA1HO95180 2353 aa10.43□□□□□ -0.74
HDAC7-229ENST00000549883 MYO16Q9Y6X6 1858 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 MYOFQ9NZM1 2061 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 C2orf78A6NCI8 922 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CETN3O15182 167 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 BEST1O76090 585 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 FAM163BP0C2L3 166 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CSH1P0DML2 217 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CSH2P0DML3 217 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 EPB41P11171 864 aaKnown RBP10.42□□□□□ -0.74
HDAC7-229ENST00000549883 KRT13P13646 458 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 PSMC3P17980 439 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CCNE1P24864 410 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CDC25CP30307 473 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 ANP32AP39687 249 aaKnown RBP10.42□□□□□ -0.74
HDAC7-229ENST00000549883 PLA2G5P39877 138 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 SOX9P48436 509 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 STARD6P59095 220 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 UBE2HP62256 183 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 NOP14P78316 857 aaKnown RBP10.42□□□□□ -0.74
HDAC7-229ENST00000549883 NHLH1Q02575 133 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 TNK2Q07912 1038 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CBWD6Q4V339 395 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 ARHGAP15Q53QZ3 475 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CBWD3Q5JTY5 395 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CBWD5Q5RIA9 395 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 TTI2Q6NXR4 508 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 C4orf50Q6ZRC1 276 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 TPRG1Q6ZUI0 275 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 ELOA2Q8IYF1 753 aaPredicted RBP10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CMTM8Q8IZV2 173 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 FUKQ8N0W3 1084 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 WHAMMQ8TF30 809 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 NELFBQ8WX92 580 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 USP13Q92995 863 aaPredicted RBP10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CCDC34Q96HJ3 373 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 FUBP3Q96I24 572 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDAC7-229ENST00000549883 MYRFLQ96LU7 910 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 MED15Q96RN5 788 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 ARID3AQ99856 593 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 DDX23Q9BUQ8 820 aaKnown RBP10.42□□□□□ -0.74
HDAC7-229ENST00000549883 ELOVL4Q9GZR5 314 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 TMEM8AQ9HCN3 771 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 FAM49BQ9NUQ9 324 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 DLGAP2Q9P1A6 1054 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 CTNND2Q9UQB3 1225 aa10.42□□□□□ -0.74
HDAC7-229ENST00000549883 GALR2O43603 387 aaPredicted RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 CD58P19256 250 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 TARSP26639 723 aaKnown RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 PGFP49763 221 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 ZXDBP98169 803 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 FKBP3Q00688 224 aaKnown RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 IFRD2Q12894 506 aaPredicted RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 FZD5Q13467 585 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 DCAF17Q5H9S7 520 aaPredicted RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 WDR44Q5JSH3 913 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 TCERG1LQ5VWI1 586 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 PHLDB3Q6NSJ2 640 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 VSTM1Q6UX27 236 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 FAM35AQ86V20 835 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 CCDC105Q8IYK2 499 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 ZMIZ2Q8NF64 920 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 SCAMP5Q8TAC9 235 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 TAF4BQ92750 862 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 FAM122AQ96E09 287 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 TRMT2BQ96GJ1 504 aaKnown RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 DHTKD1Q96HY7 919 aaPredicted RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 SPATA17Q96L03 361 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 TSG101Q99816 390 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 GPR88Q9GZN0 384 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 TRPC7Q9HCX4 862 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 GTSE1Q9NYZ3 720 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 GCNT4Q9P109 453 aa10.41□□□□□ -0.74
HDAC7-229ENST00000549883 HOOK1Q9UJC3 728 aaKnown RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 ARIH1Q9Y4X5 557 aaPredicted RBP10.41□□□□□ -0.74
HDAC7-229ENST00000549883 KANSL1LA0AUZ9 987 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 OTOL1A6NHN0 477 aaPredicted RBP10.4□□□□□ -0.74
HDAC7-229ENST00000549883 PSMA7O14818 248 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 ZNF263O14978 683 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 FGF19O95750 216 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 ADORA2BP29275 332 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 GTF2H1P32780 548 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 MXI1P50539 228 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 LRRC63Q05C16 580 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 FCHO2Q0JRZ9 810 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 UBXN2BQ14CS0 331 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 MAPRE1Q15691 268 aaKnown RBP10.4□□□□□ -0.74
HDAC7-229ENST00000549883 ZNF394Q53GI3 561 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 KRT39Q6A163 491 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 TRIM68Q6AZZ1 485 aa10.4□□□□□ -0.74
HDAC7-229ENST00000549883 DENND5BQ6ZUT9 1274 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms