RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 C8orf33Q9H7E9 229 aaPredicted RBP11.16□□□□□ -0.62
CCDC38-207ENST00000549752 KIF9Q9HAQ2 790 aa11.16□□□□□ -0.62
CCDC38-207ENST00000549752 HEBP1Q9NRV9 189 aa11.16□□□□□ -0.62
CCDC38-207ENST00000549752 FAM86C1Q9NVL1 165 aa11.16□□□□□ -0.62
CCDC38-207ENST00000549752 MAGEC2Q9UBF1 373 aaPredicted RBP11.16□□□□□ -0.62
CCDC38-207ENST00000549752 GTF3C4Q9UKN8 822 aa11.16□□□□□ -0.62
CCDC38-207ENST00000549752 ZDHHC9Q9Y397 364 aa11.16□□□□□ -0.62
CCDC38-207ENST00000549752 PTPRJQ12913 1337 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 SNPHO15079 494 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 LAMTOR5O43504 91 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 GFRA3O60609 400 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 RHOBTB3O94955 611 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 CLSTN1O94985 981 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 HOXB3P14651 431 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-207ENST00000549752 ACAT1P24752 427 aaKnown RBP11.15□□□□□ -0.62
CCDC38-207ENST00000549752 GNL1P36915 607 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-207ENST00000549752 VIPR2P41587 438 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 NDUFA8P51970 172 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 NLRP12P59046 1061 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 STK4Q13043 487 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 BIRC3Q13489 604 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 KCNB1Q14721 858 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 WDR72Q3MJ13 1102 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 FAM171BQ6P995 826 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 KRBA2Q6ZNG9 492 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 LIMS2Q7Z4I7 341 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 KIAA0895Q8NCT3 520 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 OR6B3Q8NGW1 331 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 BPIFB1Q8TDL5 484 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 NKD2Q969F2 451 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-207ENST00000549752 EXOC4Q96A65 974 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 MYRFLQ96LU7 910 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 GTPBP4Q9BZE4 634 aaKnown RBP11.15□□□□□ -0.62
CCDC38-207ENST00000549752 SPATA6Q9NWH7 488 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-207ENST00000549752 DLGAP2Q9P1A6 1054 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 HOOK1Q9UJC3 728 aaKnown RBP11.15□□□□□ -0.62
CCDC38-207ENST00000549752 FBXO4Q9UKT5 387 aa11.15□□□□□ -0.62
CCDC38-207ENST00000549752 MAGED2Q9UNF1 606 aaPredicted RBP11.15□□□□□ -0.62
CCDC38-207ENST00000549752 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 IKBKBO14920 756 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 MAPK13O15264 365 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 NOL4O94818 638 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 ZNF202O95125 648 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 CST3P01034 146 aaPredicted RBP11.14□□□□□ -0.63
CCDC38-207ENST00000549752 F11P03951 625 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 NR3C1P04150 777 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 CD46P15529 392 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 PFKLP17858 780 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 CYP2F1P24903 491 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 PPP3CCP48454 512 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 KPNA1P52294 538 aaPredicted RBP11.14□□□□□ -0.63
CCDC38-207ENST00000549752 CLDN10P78369 228 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 AMPD2Q01433 879 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 ENPEPQ07075 957 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 LRRC32Q14392 662 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 ZNF699Q32M78 642 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 ZNF528Q3MIS6 628 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 ZNF667Q5HYK9 610 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 OSTM1Q86WC4 334 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 RALGPS2Q86X27 583 aaPredicted RBP11.14□□□□□ -0.63
CCDC38-207ENST00000549752 SCN4BQ8IWT1 228 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 CMTM8Q8IZV2 173 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 MYCBPAPQ8TBZ2 947 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 PARD3BQ8TEW8 1205 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 KBTBD7Q8WVZ9 684 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 FAM3CQ92520 227 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 TAF4BQ92750 862 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 CLDN23Q96B33 292 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 SPATA17Q96L03 361 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 PKMYT1Q99640 499 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 KCTD10Q9H3F6 313 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 VRTNQ9H8Y1 702 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 IL21Q9HBE4 155 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 TMLHEQ9NVH6 421 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 DMAC2Q9NW81 257 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 RMND1Q9NWS8 449 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 LHX6Q9UPM6 363 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 TRAF3IP3Q9Y228 551 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 PIAS3Q9Y6X2 628 aa11.14□□□□□ -0.63
CCDC38-207ENST00000549752 MYOFQ9NZM1 2061 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 TRAV19A0A0A6YYK7 116 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 MYBPHLA2RUH7 354 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 SLC38A8A6NNN8 435 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 PDGFRBP09619 1106 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 KRT13P13646 458 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 HMGA1P17096 107 aaKnown RBP11.13□□□□□ -0.63
CCDC38-207ENST00000549752 TARSP26639 723 aaKnown RBP11.13□□□□□ -0.63
CCDC38-207ENST00000549752 GRIK1P39086 918 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 CYP4F8P98187 520 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 CYP27A1Q02318 531 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 DPYDQ12882 1025 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 NCOA4Q13772 614 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 ZNF268Q14587 947 aaPredicted RBP11.13□□□□□ -0.63
CCDC38-207ENST00000549752 NFIL3Q16649 462 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 DDR2Q16832 855 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 SGSM1Q2NKQ1 1148 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 STXBP5Q5T5C0 1151 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 CEP135Q66GS9 1140 aa11.13□□□□□ -0.63
CCDC38-207ENST00000549752 CC2D1AQ6P1N0 951 aaPredicted RBP11.13□□□□□ -0.63
CCDC38-207ENST00000549752 INTS8Q75QN2 995 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms