RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 NCANO14594 1321 aa18.39■□□□□ 0.53
LETMD1-220ENST00000549686 TSC2P49815 1807 aa18.39■□□□□ 0.53
LETMD1-220ENST00000549686 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
LETMD1-220ENST00000549686 ABCB4P21439 1286 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 SSTR3P32745 418 aaPredicted RBP18.38■□□□□ 0.53
LETMD1-220ENST00000549686 GABRB2P47870 512 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 GSCP56915 257 aaPredicted RBP18.38■□□□□ 0.53
LETMD1-220ENST00000549686 PDE4CQ08493 712 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 SLC39A12Q504Y0 691 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 VSTM1Q6UX27 236 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 PAQR9Q6ZVX9 377 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 ZDHHC17Q8IUH5 632 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 KLHL23Q8NBE8 558 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 SPPL2BQ8TCT7 592 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 RFFLQ8WZ73 363 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 ZNF653Q96CK0 615 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 C11orf84Q9BUA3 381 aaPredicted RBP18.38■□□□□ 0.53
LETMD1-220ENST00000549686 PACSIN1Q9BY11 444 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 LACRTQ9GZZ8 138 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 SYNCQ9H7C4 482 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 CSNK1G1Q9HCP0 422 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 MRPL47Q9HD33 250 aaKnown RBP18.38■□□□□ 0.53
LETMD1-220ENST00000549686 PNPLA8Q9NP80 782 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 LZTFL1Q9NQ48 299 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 KRT82Q9NSB4 513 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 UVRAGQ9P2Y5 699 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 MAFFQ9ULX9 164 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 PCDHB5Q9Y5E4 795 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 SCINQ9Y6U3 715 aa18.38■□□□□ 0.53
LETMD1-220ENST00000549686 RCCD1A6NED2 376 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 USP27XA6NNY8 438 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 KIF2AO00139 706 aaPredicted RBP18.37■□□□□ 0.53
LETMD1-220ENST00000549686 KIF5CO60282 957 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 AP1G2O75843 785 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 CYP1A2P05177 515 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 CTSAP10619 480 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 CPB1P15086 417 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 MAGEA11P43364 429 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 RPL34P49207 117 aaKnown RBP18.37■□□□□ 0.53
LETMD1-220ENST00000549686 RABGGTBP53611 331 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 PTP4A2Q12974 167 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 MMS22LQ6ZRQ5 1243 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 TMEM110Q86TL2 294 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 LRRTM3Q86VH5 581 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 FBXO22Q8NEZ5 403 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 KCTD13Q8WZ19 329 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 C18orf8Q96DM3 657 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 B3GALT6Q96L58 329 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 TGS1Q96RS0 853 aaKnown RBP18.37■□□□□ 0.53
LETMD1-220ENST00000549686 LPIN3Q9BQK8 851 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 C11orf70Q9BRQ4 267 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 SLC4A5Q9BY07 1137 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 THAP2Q9H0W7 228 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 ZBP1Q9H171 429 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 DMAP1Q9NPF5 467 aaPredicted RBP18.37■□□□□ 0.53
LETMD1-220ENST00000549686 FNIP2Q9P278 1114 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 HSFX1Q9UBD0 423 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 CNOT8Q9UFF9 292 aaKnown RBP18.37■□□□□ 0.53
LETMD1-220ENST00000549686 LCMT1Q9UIC8 334 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 MSRAQ9UJ68 235 aa18.37■□□□□ 0.53
LETMD1-220ENST00000549686 CLDN5O00501 218 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 HADHBP55084 474 aaKnown RBP18.36■□□□□ 0.53
LETMD1-220ENST00000549686 TAP1Q03518 808 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 ZNF268Q14587 947 aaPredicted RBP18.36■□□□□ 0.53
LETMD1-220ENST00000549686 PTPN20Q4JDL3 420 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 TPGS2Q68CL5 300 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 PRSS55Q6UWB4 352 aaPredicted RBP18.36■□□□□ 0.53
LETMD1-220ENST00000549686 CLEC20AQ6ZU45 233 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 TMEM209Q96SK2 561 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 RXFP1Q9HBX9 757 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 PARVAQ9NVD7 372 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 TMLHEQ9NVH6 421 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 CYTH4Q9UIA0 394 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 CDY1Q9Y6F8 540 aa18.36■□□□□ 0.53
LETMD1-220ENST00000549686 GRXCR1A8MXD5 290 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 TRIM66O15016 1216 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 MTA2O94776 668 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 CA3P07451 260 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 SCNN1AP37088 669 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 ERVK-21P61565 698 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 PMF1Q6P1K2 205 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 PIGZQ86VD9 579 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 C17orf53Q8N3J3 647 aaPredicted RBP18.35■□□□□ 0.53
LETMD1-220ENST00000549686 C3orf20Q8ND61 904 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 UBE2Q2Q8WVN8 375 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 CEP295NLQ96MC4 621 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 CPXM1Q96SM3 734 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 ST7Q9NRC1 585 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 GUCA1BQ9UMX6 200 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 IRAK3Q9Y616 596 aa18.35■□□□□ 0.53
LETMD1-220ENST00000549686 LILRB3O75022 631 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 OR4Q2P0C623 313 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 BDNFP23560 247 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 RRM1P23921 792 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 NDUFV1P49821 464 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 MAP3K7CLP57077 242 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 RAB33AQ14088 237 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 PTPN14Q15678 1187 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 CCDC142Q17RM4 750 aa18.34■□□□□ 0.53
LETMD1-220ENST00000549686 FAM109BQ6ICB4 259 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms