RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 CFAP221Q4G0U5 840 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 SLC44A4Q53GD3 710 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 MDH1BQ5I0G3 518 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 STXBP5Q5T5C0 1151 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 ZNF658Q5TYW1 1059 aaPredicted RBP10.15□□□□□ -0.78
USP15-208ENST00000548524 FAM171BQ6P995 826 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 SCARA5Q6ZMJ2 495 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 GAREM2Q75VX8 874 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 SV2AQ7L0J3 742 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 PRSS33Q8NF86 280 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 DEPDC1BQ8WUY9 529 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 ERCC4Q92889 916 aaPredicted RBP10.15□□□□□ -0.78
USP15-208ENST00000548524 E2F7Q96AV8 911 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 TRMT61BQ9BVS5 477 aaKnown RBP10.15□□□□□ -0.78
USP15-208ENST00000548524 XYLT2Q9H1B5 865 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 KDM4CQ9H3R0 1056 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 TASP1Q9H6P5 420 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 MMRN2Q9H8L6 949 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 VRTNQ9H8Y1 702 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 CHMP5Q9NZZ3 219 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 UXTQ9UBK9 157 aaPredicted RBP10.15□□□□□ -0.78
USP15-208ENST00000548524 PCDHA5Q9Y5H7 936 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 C2orf16Q68DN1 1984 aa10.15□□□□□ -0.78
USP15-208ENST00000548524 SLC38A8A6NNN8 435 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 ZNF263O14978 683 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 PI15O43692 258 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 GADD45BO75293 160 aaPredicted RBP10.14□□□□□ -0.79
USP15-208ENST00000548524 VNN1O95497 513 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 HLA-DRAP01903 254 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 TRIM49P0CI25 452 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 TRIM49CP0CI26 452 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 PSMC3P17980 439 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 PTPN1P18031 435 aaKnown RBP10.14□□□□□ -0.79
USP15-208ENST00000548524 BDNFP23560 247 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 ANXA13P27216 316 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 GDI1P31150 447 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 GRIK1P39086 918 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 PRCPP42785 496 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 MAGEA11P43364 429 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 RAP1GAPP47736 663 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 CDH8P55286 799 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 PRKCQQ04759 706 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 ZACNQ401N2 412 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 ZCWPW2Q504Y3 356 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 PHLDB3Q6NSJ2 640 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 VSTM1Q6UX27 236 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 VITQ6UXI7 678 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 ARID3BQ8IVW6 561 aaPredicted RBP10.14□□□□□ -0.79
USP15-208ENST00000548524 CCDC150Q8NCX0 1101 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 STKLD1Q8NE28 680 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 MYCBPAPQ8TBZ2 947 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 MRPS31Q92665 395 aaKnown RBP10.14□□□□□ -0.79
USP15-208ENST00000548524 TAF4BQ92750 862 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 IRF7Q92985 503 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 ELMO3Q96BJ8 720 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 EEF2KMTQ96G04 330 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 IMPG2Q9BZV3 1241 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 IRF2BPLQ9H1B7 796 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 SMYD3Q9H7B4 428 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 TRPV4Q9HBA0 871 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 IL21Q9HBE4 155 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 CRTAC1Q9NQ79 661 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.14□□□□□ -0.793e-6■■■■■ 50.7
USP15-208ENST00000548524 TECTAO75443 2155 aa10.14□□□□□ -0.79
USP15-208ENST00000548524 MTCL1Q9Y4B5 1905 aaKnown RBP10.13□□□□□ -0.79
USP15-208ENST00000548524 ATP8B3O60423 1300 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 STX10O60499 249 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 NOL4O94818 638 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 F11P03951 625 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 HMGA1P17096 107 aaKnown RBP10.13□□□□□ -0.79
USP15-208ENST00000548524 TRIM21P19474 475 aaKnown RBP10.13□□□□□ -0.79
USP15-208ENST00000548524 DDX6P26196 483 aaKnown RBP eCLIP10.13□□□□□ -0.79
USP15-208ENST00000548524 GCLMP48507 274 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 NLRP12P59046 1061 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 STARD6P59095 220 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 NHLH1Q02575 133 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 ENPEPQ07075 957 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 UBXN2BQ14CS0 331 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 COBLL1Q53SF7 1204 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 C1orf220Q5T0J3 134 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 ISM2Q6H9L7 571 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 TPRG1Q6ZUI0 275 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 MFSD6LQ8IWD5 586 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 ELOA2Q8IYF1 753 aaPredicted RBP10.13□□□□□ -0.79
USP15-208ENST00000548524 B3GALNT2Q8NCR0 500 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 SPATA20Q8TB22 786 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 CSGALNACT1Q8TDX6 532 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 DNASE1L2Q92874 299 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 PCED1BQ96HM7 432 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 TNIP3Q96KP6 325 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 MED10Q9BTT4 135 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 MKNK1Q9BUB5 465 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 FOXQ1Q9C009 403 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 DPEP3Q9H4B8 488 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 ZMYM5Q9UJ78 669 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 MAN1B1Q9UKM7 699 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 SIT1Q9Y3P8 196 aa10.13□□□□□ -0.79
USP15-208ENST00000548524 KANSL1LA0AUZ9 987 aa10.12□□□□□ -0.79
USP15-208ENST00000548524 F8VP50 259 aa10.12□□□□□ -0.79
USP15-208ENST00000548524 PSMA7O14818 248 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms