RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 SPATA17Q96L03 361 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 MYRFLQ96LU7 910 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 GCNAQ96QF7 691 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 ARID3AQ99856 593 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 MED10Q9BTT4 135 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 NT5C1AQ9BXI3 368 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 TMEM30AQ9NV96 361 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 DACH1Q9UI36 760 aa19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.92■□□□□ 0.78
PRPF40B-206ENST00000547764 F8VP50 259 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 SRFP11831 508 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 ANXA13P27216 316 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 ERCC5P28715 1186 aaPredicted RBP19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 ARHGAP15Q53QZ3 475 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 GPR158Q5T848 1215 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 HFE2Q6ZVN8 426 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 FAM35AQ86V20 835 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 IRF2BP1Q8IU81 584 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 FUKQ8N0W3 1084 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 C12orf29Q8N999 325 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 ELSPBP1Q96BH3 223 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 TRMT2BQ96GJ1 504 aaKnown RBP19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 CNOT6LQ96LI5 555 aaKnown RBP19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 C8orf48Q96LL4 319 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 CEP295NLQ96MC4 621 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 PLA2G2FQ9BZM2 168 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 ZFP14Q9HCL3 533 aa19.91■□□□□ 0.78
PRPF40B-206ENST00000547764 P4HA2O15460 535 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 CCDC130P13994 396 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 LRMPQ12912 555 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 TPD52L1Q16890 204 aaPredicted RBP19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 DENND5BQ6ZUT9 1274 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 CREBRFQ8IUR6 639 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 SLC2A14Q8TDB8 520 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 TASP1Q9H6P5 420 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 TRPV4Q9HBA0 871 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 CISHQ9NSE2 258 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 FAM49BQ9NUQ9 324 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 UXTQ9UBK9 157 aaPredicted RBP19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 ATP8B3O60423 1300 aa19.9■□□□□ 0.78
PRPF40B-206ENST00000547764 AFPP02771 609 aaKnown RBP19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 CFHP08603 1231 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 TRIM21P19474 475 aaKnown RBP19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 VIPR2P41587 438 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 USP46P62068 366 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 GPC5P78333 572 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 CETN1Q12798 172 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 CUL2Q13617 745 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 ZNF394Q53GI3 561 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 BMP8AQ7Z5Y6 402 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 GPIHBP1Q8IV16 184 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 ARID3BQ8IVW6 561 aaPredicted RBP19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 TTC39CQ8N584 583 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 LMO3Q8TAP4 145 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 PBXIP1Q96AQ6 731 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 SMARCD1Q96GM5 515 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 KCNK16Q96T55 309 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 SLC46A2Q9BY10 475 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 SLC2A4RGQ9NR83 387 aa19.89■□□□□ 0.77
PRPF40B-206ENST00000547764 TADA3O75528 432 aa19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 AP1G2O75843 785 aa19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 PDGFBP01127 241 aaPredicted RBP19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 CT47A1Q5JQC4 288 aaPredicted RBP19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 CCDC183Q5T5S1 534 aa19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 HNRNPABQ99729 332 aaKnown RBP19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 THAP9Q9H5L6 903 aa19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 FAM124BQ9H5Z6 455 aaPredicted RBP19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 KRT82Q9NSB4 513 aa19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 WNT16Q9UBV4 365 aa19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 FBXL21Q9UKT6 434 aa19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 GREB1Q4ZG55 1949 aa19.88■□□□□ 0.77
PRPF40B-206ENST00000547764 NCANO14594 1321 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 ADORA2BP29275 332 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 RAD23BP54727 409 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 GRM2Q14416 872 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 TXNDC8Q6A555 127 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 VITQ6UXI7 678 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 MAB21L3Q8N8X9 362 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 EHBP1Q8NDI1 1231 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 MRPS31Q92665 395 aaKnown RBP19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 RSPRY1Q96DX4 576 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 CYFIP2Q96F07 1278 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 TMEM176AQ96HP8 235 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 HEXIM2Q96MH2 286 aaKnown RBP19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 NT5C1BQ96P26 610 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 SMOQ99835 787 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 TTLL2Q9BWV7 592 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 DNAI2Q9GZS0 605 aa19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 DMAP1Q9NPF5 467 aaPredicted RBP19.87■□□□□ 0.77
PRPF40B-206ENST00000547764 HEPACAM2A8MVW5 462 aa19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 BEST1O76090 585 aa19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 TBXAS1P24557 533 aaPredicted RBP19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 DDX6P26196 483 aaKnown RBP eCLIP19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 WEE1P30291 646 aa19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 SASS6Q6UVJ0 657 aa19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 MON1AQ86VX9 555 aa19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 CMTM8Q8IZV2 173 aa19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 NUP93Q8N1F7 819 aa19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 SLC4A11Q8NBS3 891 aa19.86■□□□□ 0.77
PRPF40B-206ENST00000547764 ZMIZ2Q8NF64 920 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms