RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CYP4A22Q5TCH4 519 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 PHLDB2Q86SQ0 1253 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 CCDC50Q8IVM0 306 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 MAP7D3Q8IWC1 876 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 FAM126BQ8IXS8 530 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 ABI1Q8IZP0 508 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 SH3TC2Q8TF17 1288 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 MAGOHBQ96A72 148 aaKnown RBP14.15□□□□□ -0.14
PTCH1-215ENST00000547672 DEFB118Q96PH6 123 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 PNKPQ96T60 521 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 ACBD6Q9BR61 282 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 DUSP16Q9BY84 665 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 CXCL16Q9H2A7 254 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 PCYOX1Q9UHG3 505 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 PCDHB7Q9Y5E2 793 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 SCN1AP35498 2009 aa14.15□□□□□ -0.14
PTCH1-215ENST00000547672 MGEA5O60502 916 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 B3GAT3O94766 335 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 FBXO21O94952 628 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 GLI1P08151 1106 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 TYMPP19971 482 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 GPD1P21695 349 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 PTPN7P35236 360 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 RFC1P35251 1148 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-215ENST00000547672 PLA2G4AP47712 749 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 RPL34P49207 117 aaKnown RBP14.14□□□□□ -0.15
PTCH1-215ENST00000547672 CLCNKBP51801 687 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 RPL7AP62424 266 aaKnown RBP14.14□□□□□ -0.15
PTCH1-215ENST00000547672 DR1Q01658 176 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 ZNF211Q13398 564 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-215ENST00000547672 ORC1Q13415 861 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 BOLA3Q53S33 107 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 BEND6Q5SZJ8 279 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-215ENST00000547672 DCAF12L1Q5VU92 463 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 WSCD1Q658N2 575 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 ANKRD33Q7Z3H0 272 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 C12orf29Q8N999 325 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 C12orf50Q8NA57 414 aaPredicted RBP14.14□□□□□ -0.15
PTCH1-215ENST00000547672 TTC13Q8NBP0 860 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 KCTD13Q8WZ19 329 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 LPPQ93052 612 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 MED10Q9BTT4 135 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 TRIM62Q9BVG3 475 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 LRRC19Q9H756 370 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 VIPAS39Q9H9C1 493 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 GOLGA2P5Q9HBQ8 144 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 EPB41L5Q9HCM4 733 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 GDF3Q9NR23 364 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 DDX43Q9NXZ2 648 aaKnown RBP14.14□□□□□ -0.15
PTCH1-215ENST00000547672 EHD2Q9NZN4 543 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 OGFRQ9NZT2 677 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 LRFN2Q9ULH4 789 aa14.14□□□□□ -0.15
PTCH1-215ENST00000547672 CARNS1A5YM72 827 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 TMEM189-UBE2V1I3L0A0 370 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 M0QZQ0 153 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 DPYSL4O14531 572 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 FAM200BP0CF97 657 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 PDGFRAP16234 1089 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 RDXP35241 583 aaKnown RBP14.13□□□□□ -0.15
PTCH1-215ENST00000547672 GUCY2DQ02846 1103 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 RNASELQ05823 741 aaKnown RBP14.13□□□□□ -0.15
PTCH1-215ENST00000547672 PDE4CQ08493 712 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 CCNG2Q16589 344 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 C2CD6Q53TS8 623 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 PLEKHG4Q58EX7 1191 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 C1orf53Q5VUE5 145 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 TRAF7Q6Q0C0 670 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 ANKLE1Q8NAG6 615 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 CCHCR1Q8TD31 782 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 TBCBQ99426 244 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 OXCT2Q9BYC2 517 aaPredicted RBP14.13□□□□□ -0.15
PTCH1-215ENST00000547672 OSBPL8Q9BZF1 889 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 TSPYL1Q9H0U9 437 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 EPC1Q9H2F5 836 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 PRDM16Q9HAZ2 1276 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 METTL5Q9NRN9 209 aaKnown RBP14.13□□□□□ -0.15
PTCH1-215ENST00000547672 FAM49BQ9NUQ9 324 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 WBP1LQ9NX94 342 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 MIOSQ9NXC5 875 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 SMARCAL1Q9NZC9 954 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 CYTH4Q9UIA0 394 aa14.13□□□□□ -0.15
PTCH1-215ENST00000547672 E5RJQ4 531 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 RAD51CO43502 376 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 PRPSAP2O60256 369 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 GAS8O95995 478 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 POMCP01189 267 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 PFKMP08237 780 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 FGFR1P11362 822 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 NPR3P17342 541 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 LMO2P25791 158 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 SDC4P31431 198 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 TSPY1Q01534 308 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 PMF1Q6P1K2 205 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 SLC26A9Q7LBE3 791 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 TTC30AQ86WT1 665 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 VSIG1Q86XK7 387 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 CCDC105Q8IYK2 499 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 BBOF1Q8ND07 529 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 ATL2Q8NHH9 583 aa14.12□□□□□ -0.15
PTCH1-215ENST00000547672 MYCBPAPQ8TBZ2 947 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms