RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 NT5C1AQ9BXI3 368 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 LRRC19Q9H756 370 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 HESX1Q9UBX0 185 aa13.38□□□□□ -0.27
SCAF11-209ENST00000547018 ABT1Q9ULW3 272 aaKnown RBP13.38□□□□□ -0.27
SCAF11-209ENST00000547018 GOLGA8RI6L899 631 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 TFE3P19532 575 aaPredicted RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 HADHQ16836 314 aaKnown RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 PMF1Q6P1K2 205 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 NLRP14Q86W24 1093 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 PRMT1Q99873 361 aaKnown RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 CEP41Q9BYV8 373 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 EPB41L4BQ9H329 900 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 INPP5FQ9Y2H2 1132 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 IL18RAPO95256 599 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 FNTAP49354 379 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 ZNF132P52740 706 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 QPCTQ16769 361 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 CST9Q5W186 159 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 TMEM174Q8WUU8 243 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 ARHGEF2Q92974 986 aaKnown RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 INTS9Q9NV88 658 aaKnown RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 PRRC2BQ5JSZ5 2229 aaKnown RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 ARID2Q68CP9 1835 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 MCF2P10911 925 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 PECAM1P16284 738 aaPredicted RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 CYP3A5P20815 502 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 PROZP22891 400 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 PDIA2Q13087 525 aaKnown RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 PTGISQ16647 500 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 DARS2Q6PI48 645 aaKnown RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 FAM183BPQ6ZVS7 135 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 MSL3Q8N5Y2 521 aaKnown RBP13.37□□□□□ -0.27
SCAF11-209ENST00000547018 ARFGAP2Q8N6H7 521 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 ARFGAP1Q8N6T3 406 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 EXD1Q8NHP7 514 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 ADAM32Q8TC27 787 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 GRK7Q8WTQ7 553 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 AAASQ9NRG9 546 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 NEU2Q9Y3R4 380 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 FAM169AQ9Y6X4 670 aa13.37□□□□□ -0.27
SCAF11-209ENST00000547018 PRPSAP2O60256 369 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 CILPO75339 1184 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 KIAA0754O94854 1291 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 KRT15P19012 456 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 HOXA11P31270 313 aaPredicted RBP13.36□□□□□ -0.27
SCAF11-209ENST00000547018 KDM7AQ6ZMT4 941 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 XYLT1Q86Y38 959 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 RCOR2Q8IZ40 523 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 SPATA18Q8TC71 538 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 RBM41Q96IZ5 413 aaKnown RBP13.36□□□□□ -0.27
SCAF11-209ENST00000547018 ARHGAP39Q9C0H5 1083 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 USP18Q9UMW8 372 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 WDR91A4D1P6 747 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 MYADML2A6NDP7 307 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 PSTPIP1O43586 416 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 EIF4BP23588 611 aaKnown RBP13.36□□□□□ -0.27
SCAF11-209ENST00000547018 MFSD10Q14728 455 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 TFDP3Q5H9I0 405 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 C4orf33Q8N1A6 199 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 ART4Q93070 314 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 KIF9Q9HAQ2 790 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 TMPRSS4Q9NRS4 437 aa13.36□□□□□ -0.27
SCAF11-209ENST00000547018 A0A1B0GUA9 196 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 RBP3P10745 1247 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 PIGHQ14442 188 aaPredicted RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 KATNAL2Q8IYT4 538 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 SHCBP1Q8NEM2 672 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 ZNF473Q8WTR7 871 aaKnown RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 MED10Q9BTT4 135 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 DHX35Q9H5Z1 703 aaKnown RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 ALG13Q9NP73 1137 aaKnown RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 FEZ2Q9UHY8 353 aaPredicted RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 BARX2Q9UMQ3 279 aaPredicted RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 RARGP13631 454 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 EIF3EP60228 445 aaKnown RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 SLMAPQ14BN4 828 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 UNC45BQ8IWX7 931 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 CYP4X1Q8N118 509 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 C12orf65Q9H3J6 166 aaKnown RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 NINJ2Q9NZG7 142 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 GJD2Q9UKL4 321 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 OTOFQ9HC10 1997 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 EXOC1LA0A1B0GW35 172 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 LIASO43766 372 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 AVILO75366 819 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 SSTR1P30872 391 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 NME3Q13232 169 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 CLUL1Q15846 466 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 CCNG2Q16589 344 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 ANKRD22Q5VYY1 191 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 LRIG3Q6UXM1 1119 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 FAM47EQ6ZV65 393 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 MYCBPAPQ8TBZ2 947 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 MAIP1Q8WWC4 291 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 VCPIP1Q96JH7 1222 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 ELAC2Q9BQ52 826 aaKnown RBP13.35□□□□□ -0.27
SCAF11-209ENST00000547018 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
SCAF11-209ENST00000547018 SNX25Q9H3E2 840 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms