RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 PTF1AQ7RTS3 328 aa7.03□□□□□ -1.28
CPNE8-204ENST00000546603 ZNF280BQ86YH2 543 aa7.03□□□□□ -1.28
CPNE8-204ENST00000546603 SLC15A3Q8IY34 581 aa7.03□□□□□ -1.28
CPNE8-204ENST00000546603 MPP5Q8N3R9 675 aa7.03□□□□□ -1.28
CPNE8-204ENST00000546603 ZNF518BQ9C0D4 1074 aa7.03□□□□□ -1.28
CPNE8-204ENST00000546603 MS4A7Q9GZW8 240 aaPredicted RBP7.03□□□□□ -1.28
CPNE8-204ENST00000546603 ADAM21Q9UKJ8 722 aa7.03□□□□□ -1.28
CPNE8-204ENST00000546603 TPCN1Q9ULQ1 816 aa7.03□□□□□ -1.28
CPNE8-204ENST00000546603 MRPS17Q9Y2R5 130 aaKnown RBP7.03□□□□□ -1.28
CPNE8-204ENST00000546603 ISM1B1AKI9 464 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 MYO1FO00160 1098 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 QSOX1O00391 747 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 HNRNPCP07910 306 aaKnown RBP eCLIP7.02□□□□□ -1.29
CPNE8-204ENST00000546603 ZNF37AP17032 561 aaPredicted RBP7.02□□□□□ -1.29
CPNE8-204ENST00000546603 CYP2C18P33260 490 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 DGKEP52429 567 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 ATXN1P54253 815 aaKnown RBP7.02□□□□□ -1.29
CPNE8-204ENST00000546603 SP2Q02086 613 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 LLGL1Q15334 1064 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 AARS2Q5JTZ9 985 aaKnown RBP7.02□□□□□ -1.29
CPNE8-204ENST00000546603 COLEC12Q5KU26 742 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 FCRLBQ6BAA4 426 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 SUMO4Q6EEV6 95 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 SWSAP1Q6NVH7 229 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 CEP85Q6P2H3 762 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 COL23A1Q86Y22 540 aaPredicted RBP7.02□□□□□ -1.29
CPNE8-204ENST00000546603 TBC1D5Q92609 795 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 GLG1Q92896 1179 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 C22orf23Q9BZE7 217 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 CXorf36Q9H7Y0 433 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 SMURF2Q9HAU4 748 aa7.02□□□□□ -1.29
CPNE8-204ENST00000546603 A1CFQ9NQ94 594 aaKnown RBP7.02□□□□□ -1.29
CPNE8-204ENST00000546603 A1L4Q6 167 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 TBX3O15119 743 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 FESP07332 822 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 CLCN2P51788 898 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 PDE1AP54750 535 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 GFOD2Q3B7J2 385 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 PLA1AQ53H76 456 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 APOA5Q6Q788 366 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 ZNF804AQ7Z570 1209 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 SRGAP1Q7Z6B7 1085 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 HASPINQ8TF76 798 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 TRMT13Q9NUP7 481 aaKnown RBP7.01□□□□□ -1.29
CPNE8-204ENST00000546603 DLL3Q9NYJ7 618 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 USP19O94966 1318 aa7.01□□□□□ -1.29
CPNE8-204ENST00000546603 JTBO76095 146 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 HRGP04196 525 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 CSF1RP07333 972 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 KCNA3P22001 575 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 SUMO3P55854 103 aaPredicted RBP7□□□□□ -1.29
CPNE8-204ENST00000546603 EEFSECP57772 596 aaKnown RBP7□□□□□ -1.29
CPNE8-204ENST00000546603 PROK1P58294 105 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 PARS2Q7L3T8 475 aaKnown RBP7□□□□□ -1.29
CPNE8-204ENST00000546603 SLC29A4Q7RTT9 530 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 LRRC71Q8N4P6 559 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 RP9Q8TA86 221 aaKnown RBP7□□□□□ -1.29
CPNE8-204ENST00000546603 OSCP1Q8WVF1 389 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 RAPGEF4Q8WZA2 1011 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 XPNPEP3Q9NQH7 507 aa7□□□□□ -1.29
CPNE8-204ENST00000546603 TARM1B6A8C7 271 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 H0YIZ8 118 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 BRAFP15056 766 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 PRKAG1P54619 331 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 TBC1D25Q3MII6 688 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 ZIK1Q3SY52 487 aaPredicted RBP6.99□□□□□ -1.29
CPNE8-204ENST00000546603 DEPDC1Q5TB30 811 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 RNF220Q5VTB9 566 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 CCDC149Q6ZUS6 474 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 CHST15Q7LFX5 561 aaPredicted RBP6.99□□□□□ -1.29
CPNE8-204ENST00000546603 FANCBQ8NB91 859 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 LRTOMTQ8WZ04 291 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 DUSP22Q9NRW4 184 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 FRMD4BQ9Y2L6 1034 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 AOX1Q06278 1338 aa6.99□□□□□ -1.29
CPNE8-204ENST00000546603 VSTM5A8MXK1 200 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 TMEM233B4DJY2 109 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 PRKCGP05129 697 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 GBX1Q14549 363 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 CNGA2Q16280 664 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 DCAF12L1Q5VU92 463 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 PPP4R4Q6NUP7 873 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 DARS2Q6PI48 645 aaKnown RBP6.98□□□□□ -1.29
CPNE8-204ENST00000546603 ABRAQ8N0Z2 381 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 BPIFB1Q8TDL5 484 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 XAGE5Q8WWM1 108 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 SOCS4Q8WXH5 440 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 MAML1Q92585 1016 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 PPP2R3CQ969Q6 453 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 NMD3Q96D46 503 aaKnown RBP6.98□□□□□ -1.29
CPNE8-204ENST00000546603 R3HDM4Q96D70 268 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 LRRC27Q9C0I9 530 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 SACM1LQ9NTJ5 587 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 CPNE7Q9UBL6 633 aa6.98□□□□□ -1.29
CPNE8-204ENST00000546603 AFF4Q9UHB7 1163 aaKnown RBP6.98□□□□□ -1.29
CPNE8-204ENST00000546603 DDX20Q9UHI6 824 aaKnown RBP6.98□□□□□ -1.29
CPNE8-204ENST00000546603 CCNL1Q9UK58 526 aaPredicted RBP6.98□□□□□ -1.29
CPNE8-204ENST00000546603 TRIM43BA6NCK2 446 aa6.97□□□□□ -1.29
CPNE8-204ENST00000546603 MBD3L4A6NDZ8 208 aaPredicted RBP6.97□□□□□ -1.29
CPNE8-204ENST00000546603 MBD3L3A6NE82 208 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms