RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 WDR48Q8TAF3 677 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 BCAS3Q9H6U6 928 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 CASS4Q9NQ75 786 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 HSPBP1Q9NZL4 362 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 FBXO10Q9UK96 956 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 IGSF9BQ9UPX0 1349 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 CYP3A7-CYP3A51PA0A087WV96 503 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 DYTNA2CJ06 578 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 CARNS1A5YM72 827 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 OPLAHO14841 1288 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 ATP6V1G1O75348 118 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 ATP1A1P05023 1023 aaKnown RBP8.98□□□□□ -0.97
CLIP1-218ENST00000545889 TGFB3P10600 412 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 SLC2A3P11169 496 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 NCAM1P13591 858 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 CYP3A7P24462 503 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 DCAF6Q58WW2 860 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 CEP68Q76N32 757 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 VSTM4Q8IW00 320 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 FIBCD1Q8N539 461 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 ATPAF2Q8N5M1 289 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 SLC7A14Q8TBB6 771 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 ACSF2Q96CM8 615 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-218ENST00000545889 DNAJC7Q99615 494 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 INTS2Q9H0H0 1204 aaKnown RBP8.98□□□□□ -0.97
CLIP1-218ENST00000545889 MMADHCQ9H3L0 296 aaPredicted RBP8.98□□□□□ -0.97
CLIP1-218ENST00000545889 ATXN3LQ9H3M9 355 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 IP6K2Q9UHH9 426 aa8.98□□□□□ -0.97
CLIP1-218ENST00000545889 SOWAHBA6NEL2 793 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 C3orf70A6NLC5 250 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 FSBPO95073 299 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 PGK1P00558 417 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 LSP1P33241 339 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 ATP6V1E1P36543 226 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 C2orf54Q08AI8 447 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 UGCGQ16739 394 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 PHKG1Q16816 387 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 SH3D19Q5HYK7 790 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 ANKRD23Q86SG2 305 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 RNF10Q8N5U6 811 aaKnown RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 DNAJB3Q8WWF6 145 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 WDR35Q9P2L0 1181 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 ATP9BO43861 1147 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 TLL1O43897 1013 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 DDX5P17844 614 aaKnown RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 FLT3LGP49771 235 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 RAB27AP51159 221 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 PMS1P54277 932 aaKnown RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 FAM110CQ1W6H9 321 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 HSDL1Q3SXM5 330 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 CDKL3Q8IVW4 592 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 ATP6V0D2Q8N8Y2 350 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 SNRNP27Q8WVK2 155 aaKnown RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 NAV1Q8NEY1 1877 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 EXOC1LA0A1B0GW35 172 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 MIF4GDA9UHW6 222 aaKnown RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 CA12O43570 354 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 FARP2O94887 1054 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 PCDH8O95206 1070 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 CCNE2O96020 404 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 POMCP01189 267 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 PYGBP11216 843 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 INSRRP14616 1297 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 TMEM119Q4V9L6 283 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 IQSEC1Q6DN90 963 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 FUKQ8N0W3 1084 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 CFAP61Q8NHU2 1237 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 DACT3Q96B18 629 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 LENG1Q96BZ8 264 aaPredicted RBP8.97□□□□□ -0.97
CLIP1-218ENST00000545889 HDAC6Q9UBN7 1215 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 RPS6KL1Q9Y6S9 549 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 RREB1Q92766 1687 aa8.97□□□□□ -0.97
CLIP1-218ENST00000545889 MGEA5O60502 916 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 TOMM70O94826 608 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 KRT14P02533 472 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 SPATA31C1P0DKV0 1188 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 CKBP12277 381 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 ELNP15502 786 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 ARL4CP56559 192 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 FSTL1Q12841 308 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 SNRNP35Q16560 246 aaKnown RBP8.96□□□□□ -0.97
CLIP1-218ENST00000545889 C11orf91Q3C1V1 193 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 C4orf19Q8IY42 314 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 KIAA0895Q8NCT3 520 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 PDZD8Q8NEN9 1154 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 USP33Q8TEY7 942 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 INPP4AQ96PE3 977 aaPredicted RBP8.96□□□□□ -0.97
CLIP1-218ENST00000545889 CATSPERBQ9H7T0 1116 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 KCND2Q9NZV8 630 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 ZNF711Q9Y462 761 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 LGALS16A8MUM7 142 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 M0R2N6 131 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 PDXKO00764 312 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 ZW10O43264 779 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 HOXC6P09630 235 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 EPB42P16452 691 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 APBA1Q02410 837 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 KCNA1Q09470 495 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 MAP2K5Q13163 448 aa8.96□□□□□ -0.97
CLIP1-218ENST00000545889 CRHR2Q13324 411 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms