RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 LRSAM1Q6UWE0 723 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 MAMSTRQ6ZN01 415 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 NT5DC4Q86YG4 428 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 IRF2BP1Q8IU81 584 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 WDR49Q8IV35 697 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 CACTINQ8WUQ7 758 aaKnown RBP13.35□□□□□ -0.27
ACTN1-206ENST00000544964 ANKRD36BP1Q96IX9 119 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 CNOT6LQ96LI5 555 aaKnown RBP13.35□□□□□ -0.27
ACTN1-206ENST00000544964 IER2Q9BTL4 223 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 GPR88Q9GZN0 384 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 IL21Q9HBE4 155 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 FANCLQ9NW38 375 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 HSFX1Q9UBD0 423 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 ARMCX3Q9UH62 379 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-206ENST00000544964 ASB3Q9Y575 518 aa13.35□□□□□ -0.27
ACTN1-206ENST00000544964 SLC38A8A6NNN8 435 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 CHADO15335 359 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 GNA14O95837 355 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 TNNC2P02585 160 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 CHRNB1P11230 501 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 PAX3P23760 479 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 GABRR2P28476 465 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 ALDH1A3P47895 512 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 CDR1P51861 262 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 MYL5Q02045 173 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 PPP3CAQ08209 521 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 NCAPHQ15003 741 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 DNAJB7Q7Z6W7 309 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-206ENST00000544964 ARID3BQ8IVW6 561 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-206ENST00000544964 DHX40Q8IX18 779 aaKnown RBP13.34□□□□□ -0.27
ACTN1-206ENST00000544964 C1orf127Q8N9H9 656 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 ATRIPQ8WXE1 791 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 E2F7Q96AV8 911 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 BPIFA3Q9BQP9 254 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 TSPY26PQ9H489 355 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 THAP9Q9H5L6 903 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 METTL14Q9HCE5 456 aaKnown RBP13.34□□□□□ -0.27
ACTN1-206ENST00000544964 DLL3Q9NYJ7 618 aa13.34□□□□□ -0.27
ACTN1-206ENST00000544964 CNOT1A5YKK6 2376 aaKnown RBP13.34□□□□□ -0.27
ACTN1-206ENST00000544964 GREB1Q4ZG55 1949 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 ANAPC1Q9H1A4 1944 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 MED19A0JLT2 244 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-206ENST00000544964 ITGB3P05106 788 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 KRT19P08727 400 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 POLR2BP30876 1174 aaKnown RBP13.33□□□□□ -0.28
ACTN1-206ENST00000544964 CTHP32929 405 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 GCLMP48507 274 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 TAF6P49848 677 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 MLLT6P55198 1093 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-206ENST00000544964 ZNF445P59923 1031 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 CLDN10P78369 228 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 CYP4F8P98187 520 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 BIRC3Q13489 604 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 DUOXA2Q1HG44 320 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 SLC39A12Q504Y0 691 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 WSCD1Q658N2 575 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 Q6ZS52 159 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 TRAPPC11Q7Z392 1133 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 LRRTM3Q86VH5 581 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 GPIHBP1Q8IV16 184 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 MSANTD3Q96H12 275 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 ZFYVE19Q96K21 471 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 SEPT5Q99719 369 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-206ENST00000544964 FAM126AQ9BYI3 521 aaPredicted RBP13.33□□□□□ -0.28
ACTN1-206ENST00000544964 LMAN1LQ9HAT1 526 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 CBX8Q9HC52 389 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 RBM12Q9NTZ6 932 aaKnown RBP13.33□□□□□ -0.28
ACTN1-206ENST00000544964 NCDNQ9UBB6 729 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 DSEQ9UL01 958 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 AGAP1Q9UPQ3 857 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 SDK1Q7Z5N4 2213 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 PTPRDP23468 1912 aa13.33□□□□□ -0.28
ACTN1-206ENST00000544964 CHD8Q9HCK8 2581 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 KIAA1549LQ6ZVL6 1849 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 MYO16Q9Y6X6 1858 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 MYBPHLA2RUH7 354 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 KCNJ18B7U540 433 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 CYB561D2O14569 222 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 IKBKBO14920 756 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 PHACTR2O75167 634 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 C4BPAP04003 597 aaKnown RBP13.32□□□□□ -0.28
ACTN1-206ENST00000544964 TGM1P22735 817 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 MTIF2P46199 727 aaKnown RBP13.32□□□□□ -0.28
ACTN1-206ENST00000544964 CCR3P51677 355 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 MARSP56192 900 aaKnown RBP13.32□□□□□ -0.28
ACTN1-206ENST00000544964 MCCD1P59942 119 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-206ENST00000544964 SATB1Q01826 763 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 KCNJ12Q14500 433 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 IQCB1Q15051 598 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 CDKAL1Q5VV42 579 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 TDRD10Q5VZ19 366 aaKnown RBP13.32□□□□□ -0.28
ACTN1-206ENST00000544964 SV2AQ7L0J3 742 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 DGLUCYQ7Z3D6 616 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 TMEM150AQ86TG1 271 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 ITIH5Q86UX2 942 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 FAM114A1Q8IWE2 563 aa13.32□□□□□ -0.28
ACTN1-206ENST00000544964 TRIM59Q8IWR1 403 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms