RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 PASD1Q8IV76 773 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 IFT20Q8IY31 132 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 FUKQ8N0W3 1084 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM86AQ8N2M4 240 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 TTC39CQ8N584 583 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 C1orf131Q8NDD1 294 aaKnown RBP7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 HERVK_113Q902F9 699 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 CAPZA3Q96KX2 299 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 B3GALT6Q96L58 329 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM175Q9BSA9 504 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 MRPL9Q9BYD2 267 aaKnown RBP7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 THAP2Q9H0W7 228 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 LHX5Q9H2C1 402 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 FAM49BQ9NUQ9 324 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 TMLHEQ9NVH6 421 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 LRFN2Q9ULH4 789 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 PCDHB8Q9UN66 801 aa7.41□□□□□ -1.22
HMGCS2-204ENST00000544913 A8MXQ7 604 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 TMCO5BA8MYB1 307 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 NT5C1B-RDH14C9J2C7 533 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 HUS1O60921 280 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 PALMO75781 387 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 MICAL2O94851 1124 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 VNN2O95498 520 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 LSM8O95777 96 aaKnown RBP7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 FTLP02792 175 aaPredicted RBP7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 AMHP03971 560 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 TMEM253P0C7T8 217 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 VDRP11473 427 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 CCDC130P13994 396 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 TNFAIP3P21580 790 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 MMP8P22894 467 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 OAS2P29728 719 aaKnown RBP7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 GNL1P36915 607 aaPredicted RBP7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 OR1G1P47890 313 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 RPL34P49207 117 aaKnown RBP7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 C9orf50Q5SZB4 431 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 FAM109BQ6ICB4 259 aaPredicted RBP7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 ACAD10Q6JQN1 1059 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 FAM117BQ6P1L5 589 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 FAM171BQ6P995 826 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 SPRED2Q7Z698 418 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 CMTR2Q8IYT2 770 aaKnown RBP7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 ABI1Q8IZP0 508 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 SLC39A11Q8N1S5 342 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 LRRC57Q8N9N7 239 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 B3GALNT2Q8NCR0 500 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 OR6B3Q8NGW1 331 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 SPATA18Q8TC71 538 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 ACTRT1Q8TDG2 376 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 COG1Q8WTW3 980 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 CPA5Q8WXQ8 436 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 CPXM1Q96SM3 734 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 B3GNT5Q9BYG0 378 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 STIM2Q9P246 746 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 CHORDC1Q9UHD1 332 aaPredicted RBP7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 ADAM28Q9UKQ2 775 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 PATJQ8NI35 1801 aa7.4□□□□□ -1.22
HMGCS2-204ENST00000544913 MYBPHLA2RUH7 354 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 LCHNA4D1U4 455 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 CCDC188H7C350 402 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 RTN2O75298 545 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 BEST1O76090 585 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 MTA2O94776 668 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 FGBP02675 491 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 CYP1A2P05177 515 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 CHRM1P11229 460 aaPredicted RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 ODC1P11926 461 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 CD19P15391 556 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 PTPN1P18031 435 aaKnown RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 PAX3P23760 479 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 NOP2P46087 812 aaKnown RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 RNASELQ05823 741 aaKnown RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 GOLGA7BQ2TAP0 167 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 RTP2Q5QGT7 225 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 PPP1R15BQ5SWA1 713 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 ALS2CLQ60I27 953 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 C8orf74Q6P047 294 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 PSRC1Q6PGN9 363 aaPredicted RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 DSTYKQ6XUX3 929 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 TRIM72Q6ZMU5 477 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 MMS22LQ6ZRQ5 1243 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 SLFN11Q7Z7L1 901 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 RHOT2Q8IXI1 618 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 MCOLN2Q8IZK6 566 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 ZMIZ2Q8NF64 920 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 SLC2A14Q8TDB8 520 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 SLC35F5Q8WV83 523 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 IGSF21Q96ID5 467 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 PIWIL1Q96J94 861 aaKnown RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 HEXIM2Q96MH2 286 aaKnown RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 NAP1L3Q99457 506 aaPredicted RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 HNRNPABQ99729 332 aaKnown RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 SYT15Q9BQS2 421 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 TRIM7Q9C029 511 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 OSGEPQ9NPF4 335 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 DDX43Q9NXZ2 648 aaKnown RBP7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 TSPAN16Q9UKR8 245 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 KIAA1257Q9ULG3 409 aa7.4□□□□□ -1.23
HMGCS2-204ENST00000544913 ANKRD62A6NC57 917 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms