RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 PCED1BQ96HM7 432 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 SELENOOQ9BVL4 669 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 CWH43Q9H720 699 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 CYLDQ9NQC7 956 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 COL4A6Q14031 1691 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 GOLGA8SH3BPF8 625 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 COMTP21964 271 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 SLC8A3P57103 927 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 RPL7AP62424 266 aaKnown RBP32.11■■■□□ 2.73
CCM2-219ENST00000544363 BADQ92934 168 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 PKMYT1Q99640 499 aa32.11■■■□□ 2.73
CCM2-219ENST00000544363 SF3B1O75533 1304 aaKnown RBP eCLIP32.1■■■□□ 2.732e-7■■■■■ 82.1
CCM2-219ENST00000544363 SIGLEC16A6NMB1 481 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 NT5C1B-RDH14C9J2C7 533 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 XPO1O14980 1071 aaKnown RBP32.1■■■□□ 2.73
CCM2-219ENST00000544363 NPR3P17342 541 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 PLA2G4AP47712 749 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 RPL34P49207 117 aaKnown RBP32.1■■■□□ 2.73
CCM2-219ENST00000544363 TSPY1Q01534 308 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 DCUN1D2Q6PH85 259 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 C16orf59Q7L2K0 433 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 OTOP2Q7RTS6 562 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 MCEEQ96PE7 176 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 PSMB7Q99436 277 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 GPR62Q9BZJ7 368 aa32.1■■■□□ 2.73
CCM2-219ENST00000544363 RC3H2Q9HBD1 1191 aaKnown RBP32.1■■■□□ 2.73
CCM2-219ENST00000544363 SLU7O95391 586 aaKnown RBP32.09■■■□□ 2.73
CCM2-219ENST00000544363 FAM200BP0CF97 657 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 KRT3P12035 628 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 DNA2P51530 1060 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 FPGSQ05932 587 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 ELAVL2Q12926 359 aaKnown RBP32.09■■■□□ 2.73
CCM2-219ENST00000544363 FAM171A1Q5VUB5 890 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 FUT10Q6P4F1 479 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 TMCO2Q7Z6W1 182 aaPredicted RBP32.09■■■□□ 2.73
CCM2-219ENST00000544363 FAM35AQ86V20 835 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 MYRIPQ8NFW9 859 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 HSFY1Q96LI6 401 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 LCMT1Q9UIC8 334 aa32.09■■■□□ 2.73
CCM2-219ENST00000544363 PROSCO94903 275 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 CXCR5P32302 372 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 PBX3P40426 434 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 ALDH7A1P49419 539 aaKnown RBP32.08■■■□□ 2.73
CCM2-219ENST00000544363 MAPRE1Q15691 268 aaKnown RBP32.08■■■□□ 2.73
CCM2-219ENST00000544363 FAM117BQ6P1L5 589 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 C7orf61Q8IZ16 206 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 COG1Q8WTW3 980 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 TMEM209Q96SK2 561 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 CARD6Q9BX69 1037 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 KRT82Q9NSB4 513 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 IP6K2Q9UHH9 426 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 PIK3R2O00459 728 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 ZNF185O15231 689 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 GABBR2O75899 941 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 FGBP02675 491 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 FGFR3P22607 806 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 SLC1A1P43005 524 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 ACADSBP45954 432 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 VARS2Q5ST30 1063 aaKnown RBP32.08■■■□□ 2.73
CCM2-219ENST00000544363 OR6B2Q6IFH4 312 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 CLEC20AQ6ZU45 233 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 FAM183BPQ6ZVS7 135 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 MYLPFQ96A32 169 aa32.08■■■□□ 2.73
CCM2-219ENST00000544363 MIF4GDA9UHW6 222 aaKnown RBP32.07■■■□□ 2.72
CCM2-219ENST00000544363 SPOPO43791 374 aa32.07■■■□□ 2.72
CCM2-219ENST00000544363 LRRTM3Q86VH5 581 aa32.07■■■□□ 2.72
CCM2-219ENST00000544363 TMEM173Q86WV6 379 aaPredicted RBP32.07■■■□□ 2.72
CCM2-219ENST00000544363 CD101Q93033 1021 aa32.07■■■□□ 2.72
CCM2-219ENST00000544363 METTL5Q9NRN9 209 aaKnown RBP32.07■■■□□ 2.72
CCM2-219ENST00000544363 KCNK3O14649 394 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 DDX3YO15523 660 aaKnown RBP32.06■■■□□ 2.72
CCM2-219ENST00000544363 MRPL58Q14197 206 aaKnown RBP32.06■■■□□ 2.72
CCM2-219ENST00000544363 FAM102AQ5T9C2 384 aaPredicted RBP32.06■■■□□ 2.72
CCM2-219ENST00000544363 ZNF365Q70YC5 407 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 PIGZQ86VD9 579 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 CEP57Q86XR8 500 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 CPNE8Q86YQ8 564 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 CREG2Q8IUH2 290 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 ZDHHC17Q8IUH5 632 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 CMTR2Q8IYT2 770 aaKnown RBP32.06■■■□□ 2.72
CCM2-219ENST00000544363 CEP112Q8N8E3 955 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 BCL7CQ8WUZ0 217 aaPredicted RBP32.06■■■□□ 2.72
CCM2-219ENST00000544363 SMARCD1Q96GM5 515 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 CAPZA3Q96KX2 299 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 TMLHEQ9NVH6 421 aa32.06■■■□□ 2.72
CCM2-219ENST00000544363 CES2O00748 559 aa32.05■■■□□ 2.72
CCM2-219ENST00000544363 AP1G2O75843 785 aa32.05■■■□□ 2.72
CCM2-219ENST00000544363 BEST1O76090 585 aa32.05■■■□□ 2.72
CCM2-219ENST00000544363 RFC1P35251 1148 aaPredicted RBP32.05■■■□□ 2.72
CCM2-219ENST00000544363 CDR1P51861 262 aa32.05■■■□□ 2.72
CCM2-219ENST00000544363 PBKQ96KB5 322 aa32.05■■■□□ 2.72
CCM2-219ENST00000544363 VWA8A3KMH1 1905 aa32.05■■■□□ 2.72
CCM2-219ENST00000544363 PAPSS1O43252 624 aaPredicted RBP32.04■■■□□ 2.72
CCM2-219ENST00000544363 MAN1A1P33908 653 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 TERF1P54274 439 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 MAP3K7CLP57077 242 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 MNS1Q8NEH6 495 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 JOSD2Q8TAC2 188 aa32.04■■■□□ 2.72
CCM2-219ENST00000544363 GADD45GIP1Q8TAE8 222 aaPredicted RBP32.04■■■□□ 2.72
CCM2-219ENST00000544363 KCTD13Q8WZ19 329 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms