RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 XRCC4Q13426 336 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 WDR78Q5VTH9 848 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 ILDR2Q71H61 639 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 PPIL6Q8IXY8 311 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 MGARPQ8TDB4 240 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 HPDLQ96IR7 371 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 MIS12Q9H081 205 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 SYNCQ9H7C4 482 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 ASNSD1Q9NWL6 643 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 SLC24A2Q9UI40 661 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 PNMA3Q9UL41 463 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 BARX2Q9UMQ3 279 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-208ENST00000544327 SLC12A4Q9UP95 1085 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 M0QYV0 167 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 PRPF4O43172 522 aaKnown RBP eCLIP18.6■□□□□ 0.572e-6■□□□□ 9.7
SCARB1-208ENST00000544327 ENDOD1O94919 500 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 TRUB2O95900 331 aaKnown RBP18.6■□□□□ 0.57
SCARB1-208ENST00000544327 RDXP35241 583 aaKnown RBP18.6■□□□□ 0.57
SCARB1-208ENST00000544327 ZNF143P52747 638 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-208ENST00000544327 IGBP1P78318 339 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 RBP5P82980 135 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 TTLL12Q14166 644 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-208ENST00000544327 USP50Q70EL3 339 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-208ENST00000544327 SRRM1Q8IYB3 904 aaKnown RBP18.6■□□□□ 0.57
SCARB1-208ENST00000544327 ANKRD42Q8N9B4 389 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 PLCD4Q9BRC7 762 aa18.6■□□□□ 0.57
SCARB1-208ENST00000544327 ZMYND8Q9ULU4 1186 aaPredicted RBP18.6■□□□□ 0.57
SCARB1-208ENST00000544327 PLXNB2O15031 1838 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 FAM47DPA6NHR8 397 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 RASA4BC9J798 803 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 E7ESA3 106 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 APOC4-APOC2K7ER74 178 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 RASA4O43374 803 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 RNF8O76064 485 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 APOC2P02655 101 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 TSHRP16473 764 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 MIPP30301 263 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 PLCB3Q01970 1234 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 SNAPC2Q13487 334 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 FASTKD3Q14CZ7 662 aaKnown RBP18.59■□□□□ 0.57
SCARB1-208ENST00000544327 TMED2Q15363 201 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 SMTNL2Q2TAL5 461 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 MTHFD1LQ6UB35 978 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 LCLAT1Q6UWP7 414 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 TRPM8Q7Z2W7 1104 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 ZNF467Q7Z7K2 595 aaPredicted RBP18.59■□□□□ 0.57
SCARB1-208ENST00000544327 EMC1Q8N766 993 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 NAT8LQ8N9F0 302 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 CPB2Q96IY4 423 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 SLC40A1Q9NP59 571 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 FGFR1OP2Q9NVK5 253 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 RNF181Q9P0P0 153 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 TBK1Q9UHD2 729 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 AKT3Q9Y243 479 aa18.59■□□□□ 0.57
SCARB1-208ENST00000544327 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.59■□□□□ 0.57
SCARB1-208ENST00000544327 RALGAPA2Q2PPJ7 1873 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 FOXO6A8MYZ6 492 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 TSPAN1O60635 241 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 STX2P32856 288 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 GJA5P36382 358 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 CTCFP49711 727 aaPredicted RBP18.58■□□□□ 0.57
SCARB1-208ENST00000544327 CCNA1P78396 465 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 STILQ15468 1287 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 HIF1AQ16665 826 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 EFHC2Q5JST6 749 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 LDLRAD1Q5T700 205 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 KCTD6Q8NC69 237 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 CPT1BQ92523 772 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 ADPGKQ9BRR6 497 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 C16orf70Q9BSU1 422 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 CNPY3Q9BT09 278 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 KATNBL1Q9H079 304 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 RSAD1Q9HA92 442 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 USP18Q9UMW8 372 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 AGAP1Q9UPQ3 857 aa18.58■□□□□ 0.57
SCARB1-208ENST00000544327 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.58■□□□□ 0.56
SCARB1-208ENST00000544327 A0A1B0GUA9 196 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 SUN1O94901 812 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 IFNB1P01574 187 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 RPL22P35268 128 aaKnown RBP18.58■□□□□ 0.56
SCARB1-208ENST00000544327 ARL4CP56559 192 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 PDIA2Q13087 525 aaKnown RBP18.58■□□□□ 0.56
SCARB1-208ENST00000544327 CBLBQ13191 982 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 ORC1Q13415 861 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 KCNT1Q5JUK3 1230 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 MAP1SQ66K74 1059 aaPredicted RBP18.58■□□□□ 0.56
SCARB1-208ENST00000544327 ZBED8Q8IZ13 594 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 TMEM130Q8N3G9 435 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 GPRC5AQ8NFJ5 357 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 DENND1AQ8TEH3 1009 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 GRAMD1AQ96CP6 724 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 L3MBTL3Q96JM7 780 aaPredicted RBP18.58■□□□□ 0.56
SCARB1-208ENST00000544327 HEXIM2Q96MH2 286 aaKnown RBP18.58■□□□□ 0.56
SCARB1-208ENST00000544327 DPP3Q9NY33 737 aa18.58■□□□□ 0.56
SCARB1-208ENST00000544327 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.58■□□□□ 0.56
SCARB1-208ENST00000544327 SMG5Q9UPR3 1016 aaKnown RBP18.58■□□□□ 0.56
SCARB1-208ENST00000544327 C2CD4BA6NLJ0 364 aa18.57■□□□□ 0.56
SCARB1-208ENST00000544327 CD48P09326 243 aa18.57■□□□□ 0.56
SCARB1-208ENST00000544327 HOXD8P13378 290 aaPredicted RBP18.57■□□□□ 0.56
SCARB1-208ENST00000544327 CYP3A5P20815 502 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms