RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 PPP1R26Q5T8A7 1209 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 C2orf16Q68DN1 1984 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 DNAJB7Q7Z6W7 309 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 ITIH5Q86UX2 942 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 GIPC2Q8TF65 315 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 PSMG2Q969U7 264 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 C8orf48Q96LL4 319 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 CEP295NLQ96MC4 621 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 PCMTD1Q96MG8 357 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 NAA15Q9BXJ9 866 aaKnown RBP18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 GANQ9H2C0 597 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 POMKQ9H5K3 350 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 FAM207AQ9NSI2 230 aaPredicted RBP18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 TMEM30AQ9NV96 361 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 HCFC1R1Q9NWW0 138 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 DAAM1Q9Y4D1 1078 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 FHOD1Q9Y613 1164 aa18.16■□□□□ 0.5
RABGGTA-203ENST00000543002 CLUHO75153 1309 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 F8VP50 259 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 AP1G2O75843 785 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 NOL4O94818 638 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 RHOP08100 348 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 BMP1P13497 986 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 CD19P15391 556 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 ADORA2BP29275 332 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 CACNA2D1P54289 1103 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 NTHL1P78549 312 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 SGO2Q562F6 1265 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 SDHAF4Q5VUM1 108 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 LEMD2Q8NC56 503 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 SPATA17Q96L03 361 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 CORO1BQ9BR76 489 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 ANP32EQ9BTT0 268 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 DMAP1Q9NPF5 467 aaPredicted RBP18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 AVENQ9NQS1 362 aaPredicted RBP18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 KRT82Q9NSB4 513 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 XIRP2A4UGR9 3374 aa18.15■□□□□ 0.5
RABGGTA-203ENST00000543002 FAM200BP0CF97 657 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 CSH1P0DML2 217 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 CSH2P0DML3 217 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 ANXA13P27216 316 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 EPHA5P54756 1037 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 UBASH3AP57075 661 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 RAPGEF1Q13905 1077 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 DRAP1Q14919 205 aaPredicted RBP18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 PABPC1LQ4VXU2 614 aaKnown RBP18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 HS6ST3Q8IZP7 471 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 NEK11Q8NG66 645 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 GPR152Q8TDT2 470 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 SMOQ99835 787 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 PHF7Q9BWX1 381 aaPredicted RBP18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 LRRC3Q9BY71 257 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 STK33Q9BYT3 514 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 GPR88Q9GZN0 384 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 CSNK1G1Q9HCP0 422 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 ASAH2Q9NR71 780 aa18.14■□□□□ 0.49
RABGGTA-203ENST00000543002 A0A1W2PQC6 194 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 SLC38A8A6NNN8 435 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 O00370 1275 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 FOXN3O00409 490 aaPredicted RBP18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 EPHB6O15197 1021 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 HMGA1P17096 107 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 FSHRP23945 695 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 USP8P40818 1118 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 POLR2FP61218 127 aaKnown RBP18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 TAF12Q16514 161 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 CYP4A22Q5TCH4 519 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 TMC8Q8IU68 726 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 FAM71AQ8IYT1 594 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 ZMIZ2Q8NF64 920 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 TFAP2BQ92481 460 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 KCNK16Q96T55 309 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 DUSP16Q9BY84 665 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 DOCK6Q96HP0 2047 aa18.13■□□□□ 0.49
RABGGTA-203ENST00000543002 ZNF197O14709 1029 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 BEST1O76090 585 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 MYL4P12829 197 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 BRD2P25440 801 aaKnown RBP18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 MAP3K7CLP57077 242 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 MTMR3Q13615 1198 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 STILQ15468 1287 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 CNGA2Q16280 664 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 TJAP1Q5JTD0 557 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 PRSS36Q5K4E3 855 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 CLEC20AQ6ZU45 233 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 DENND5BQ6ZUT9 1274 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 PDZD4Q76G19 769 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 GAS2L3Q86XJ1 694 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 ANKRD52Q8NB46 1076 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 STKLD1Q8NE28 680 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 TRMT2BQ96GJ1 504 aaKnown RBP18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 MYRFLQ96LU7 910 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 ZSWIM1Q9BR11 485 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 ZNF334Q9HCZ1 680 aaPredicted RBP18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 IFNKQ9P0W0 207 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 PRKAG3Q9UGI9 489 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 TSPAN16Q9UKR8 245 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 MRPS23Q9Y3D9 190 aaKnown RBP18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 NOTCH4Q99466 2003 aa18.12■□□□□ 0.49
RABGGTA-203ENST00000543002 CYP26A1O43174 497 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms