RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 ANAPC1Q9H1A4 1944 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 BICDL2A1A5D9 508 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 TADA3O75528 432 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 NDST1P52848 882 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 CYP4F8P98187 520 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 PFKPQ01813 784 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 CBWD6Q4V339 395 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 CBWD3Q5JTY5 395 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 CBWD5Q5RIA9 395 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 IER5LQ5T953 404 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 CWF19L1Q69YN2 538 aaKnown RBP16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 ASTLQ6HA08 431 aaPredicted RBP16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 ARID3BQ8IVW6 561 aaPredicted RBP16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 MFSD6LQ8IWD5 586 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 IPO9Q96P70 1041 aaKnown RBP16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 GCNAQ96QF7 691 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 ZNF518BQ9C0D4 1074 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 ELOVL4Q9GZR5 314 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 CLSTN2Q9H4D0 955 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 METTL14Q9HCE5 456 aaKnown RBP16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 ARHGEF3Q9NR81 526 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 RAB20Q9NX57 234 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 UXTQ9UBK9 157 aaPredicted RBP16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 HMGXB4Q9UGU5 601 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 ZMYM5Q9UJ78 669 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 CA14Q9ULX7 337 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 ZNF638Q14966 1978 aaKnown RBP16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 COL4A2P08572 1712 aa16.45■□□□□ 0.22
ECHDC2-223ENST00000542552 HEPACAM2A8MVW5 462 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 F8VP50 259 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 CLDN5O00501 218 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 TRIM66O15016 1216 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 PMM2O15305 246 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 PSMC3P17980 439 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 DDX6P26196 483 aaKnown RBP eCLIP16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 GRIK1P39086 918 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 FCHO2Q0JRZ9 810 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 PAK1Q13153 545 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 DCAF17Q5H9S7 520 aaPredicted RBP16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 TCERG1LQ5VWI1 586 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 PHLDB3Q6NSJ2 640 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 ACOT1Q86TX2 421 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 MON1AQ86VX9 555 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 FUKQ8N0W3 1084 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 TMEM105Q8N8V8 129 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 DEPDC1BQ8WUY9 529 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 LRRC3BQ96PB8 259 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 DDX23Q9BUQ8 820 aaKnown RBP16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 TRMT61BQ9BVS5 477 aaKnown RBP16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 TTLL2Q9BWV7 592 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 MFSD1Q9H3U5 465 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 TRPV5Q9NQA5 729 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 OBP2AQ9NY56 170 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 MAGED2Q9UNF1 606 aaPredicted RBP16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 CTNND2Q9UQB3 1225 aa16.44■□□□□ 0.22
ECHDC2-223ENST00000542552 CLSTN1O94985 981 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 PRAMEF12O95522 483 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 AOC1P19801 751 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 NUBP1P53384 320 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 MARSP56192 900 aaKnown RBP16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 STARD6P59095 220 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 USP46P62068 366 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 GRM2Q14416 872 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 SLC44A4Q53GD3 710 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 DENND5BQ6ZUT9 1274 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 CCDC150Q8NCX0 1101 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 WHAMMQ8TF30 809 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 DNASE1L2Q92874 299 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 MED15Q96RN5 788 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 TWNKQ96RR1 684 aa16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 FAM124BQ9H5Z6 455 aaPredicted RBP16.43■□□□□ 0.22
ECHDC2-223ENST00000542552 KIF26AQ9ULI4 1882 aaPredicted RBP16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 DMDP11532 3685 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 ARNTLO00327 626 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 PI15O43692 258 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 CILPO75339 1184 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 ANXA13P27216 316 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 STX17P56962 302 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 PRKCQQ04759 706 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 ORC1Q13415 861 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 TXNDC8Q6A555 127 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 FAM35AQ86V20 835 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 GPIHBP1Q8IV16 184 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 CMTM8Q8IZV2 173 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 C12orf29Q8N999 325 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 FLCNQ8NFG4 579 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 MRPS31Q92665 395 aaKnown RBP16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 TATDN2Q93075 761 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 TBC1D17Q9HA65 648 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 RWDD2AQ9UIY3 292 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 COL4A3Q01955 1670 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 ATP8B3O60423 1300 aa16.42■□□□□ 0.22
ECHDC2-223ENST00000542552 TICRRQ7Z2Z1 1910 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 SHISA7A6NL88 538 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 TNFRSF10BO14763 440 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 GNA14O95837 355 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 GDI1P31150 447 aa16.41■□□□□ 0.22
ECHDC2-223ENST00000542552 FMO5P49326 533 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms