RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 FAM187AA6NFU0 413 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 TP73O15350 636 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 TKTP29401 623 aaKnown RBP18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 HSPA9P38646 679 aaKnown RBP18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 SCNN1GP51170 649 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 ITGA7Q13683 1181 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 RSPH3Q86UC2 560 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 NIPA2Q8N8Q9 360 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 SLC35F5Q8WV83 523 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 KHSRPQ92945 711 aaKnown RBP eCLIP18.17■□□□□ 0.52e-8■■□□□ 11.6
TMEM50B-210ENST00000542230 PLVAPQ9BX97 442 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 MIS12Q9H081 205 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 RAB17Q9H0T7 212 aa18.17■□□□□ 0.5
TMEM50B-210ENST00000542230 ARL5CA6NH57 179 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 C3orf70A6NLC5 250 aaPredicted RBP18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 VPS41P49754 854 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 LPIN1Q14693 890 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 PPP2R5EQ16537 467 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 CDO1Q16878 200 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 HSP90B2PQ58FF3 399 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 MAP3K21Q5TCX8 1036 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 KIAA0319Q5VV43 1072 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 WSCD1Q658N2 575 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 APPL2Q8NEU8 664 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 PEBP4Q96S96 227 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 TRPV6Q9H1D0 765 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 FAM114A2Q9NRY5 505 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 GDAP2Q9NXN4 497 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 CLDN5O00501 218 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 TFE3P19532 575 aaPredicted RBP18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 MIPP30301 263 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 CLCNKBP51801 687 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 TAP1Q03518 808 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 KRT17Q04695 432 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 DHX9Q08211 1270 aaKnown RBP18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 GPS2Q13227 327 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 SPOCD1Q6ZMY3 1216 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 TMC3Q7Z5M5 1100 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 MREGQ8N565 214 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 GLIS1Q8NBF1 620 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 SLC2A14Q8TDB8 520 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 RXFP2Q8WXD0 754 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 NDRG1Q92597 394 aaKnown RBP18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 CFAP57Q96MR6 1250 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 C10orf88Q9H8K7 445 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 DDX20Q9UHI6 824 aaKnown RBP18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 ADAM21Q9UKJ8 722 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 KIAA1257Q9ULG3 409 aa18.16■□□□□ 0.5
TMEM50B-210ENST00000542230 THSD7BQ9C0I4 1608 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 CASTOR2A6NHX0 329 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 PAPSS1O43252 624 aaPredicted RBP18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 FNTAP49354 379 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 ACLYP53396 1101 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 PAN2Q504Q3 1202 aaKnown RBP18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 CFAP58Q5T655 872 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 LIMS2Q7Z4I7 341 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 ADGRF2Q8IZF7 708 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 FAM71BQ8TC56 605 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 ADAM33Q9BZ11 813 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 TSPYL2Q9H2G4 693 aaPredicted RBP18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 CASP8AP2Q9UKL3 1982 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 I3L4J1 428 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 ECEL1O95672 775 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 CDKN2BP42772 138 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 DYNLT1P63172 113 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 ATP11AP98196 1134 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 PPP1R7Q15435 360 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 TTMPQ5BVD1 217 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 OLFML1Q6UWY5 402 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 RCOR2Q8IZ40 523 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 RAET1EQ8TD07 263 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 CCDC114Q96M63 670 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 FMO2Q99518 471 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 SNX25Q9H3E2 840 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 ACBD3Q9H3P7 528 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 MED4Q9NPJ6 270 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 DNPEPQ9ULA0 475 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 PLAAQ9Y263 795 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 ATP8A1Q9Y2Q0 1164 aa18.15■□□□□ 0.5
TMEM50B-210ENST00000542230 C2CD4BA6NLJ0 364 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 CYB561D2O14569 222 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 HSF2BPO75031 334 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 POMCP01189 267 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 PDGFRAP16234 1089 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 GSCP56915 257 aaPredicted RBP18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 KCTD16Q68DU8 428 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 UNC93AQ86WB7 457 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 EIF1ADQ8N9N8 165 aaKnown RBP18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 UBE2Q2Q8WVN8 375 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 ZNF560Q96MR9 790 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 SH3GL2Q99962 352 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 SLC4A5Q9BY07 1137 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 FAM204AQ9H8W3 233 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 WDR35Q9P2L0 1181 aa18.14■□□□□ 0.49
TMEM50B-210ENST00000542230 hCG_1818297A0A087WSY0 165 aa18.13■□□□□ 0.49
TMEM50B-210ENST00000542230 F8W810 466 aa18.13■□□□□ 0.49
TMEM50B-210ENST00000542230 HUS1O60921 280 aa18.13■□□□□ 0.49
TMEM50B-210ENST00000542230 BEST1O76090 585 aa18.13■□□□□ 0.49
TMEM50B-210ENST00000542230 MYCP01106 439 aaPredicted RBP18.13■□□□□ 0.49
TMEM50B-210ENST00000542230 LRPAP1P30533 357 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms