RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 PPM1JQ5JR12 505 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 FAM171BQ6P995 826 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 C4orf50Q6ZRC1 276 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 STXBP4Q6ZWJ1 553 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 CACNA2D4Q7Z3S7 1137 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 KBTBD6Q86V97 674 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 FSIP1Q8NA03 581 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 OSCP1Q8WVF1 389 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 MYLPFQ96A32 169 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 RALGAPA1Q6GYQ0 2036 aa25.69■■□□□ 1.7
LEMD3-203ENST00000541171 OBSL1O75147 1896 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 KIAA0391O15091 583 aaKnown RBP25.68■■□□□ 1.7
LEMD3-203ENST00000541171 PSMD2Q13200 908 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 SURF1Q15526 300 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 DUOXA2Q1HG44 320 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 AASDHQ4L235 1098 aaPredicted RBP25.68■■□□□ 1.7
LEMD3-203ENST00000541171 DPH6Q7L8W6 267 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 SH3RF2Q8TEC5 729 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 KBTBD7Q8WVZ9 684 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 EXOC4Q96A65 974 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 HHIPQ96QV1 700 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 MMS19Q96T76 1030 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 HSPBP1Q9NZL4 362 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 CDH9Q9ULB4 789 aa25.68■■□□□ 1.7
LEMD3-203ENST00000541171 HDCP19113 662 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 BDNFP23560 247 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 GRIK1P39086 918 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 MAGEA11P43364 429 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 CYP27A1Q02318 531 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 KCNB1Q14721 858 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 SF3A2Q15428 464 aaKnown RBP25.67■■□□□ 1.7
LEMD3-203ENST00000541171 RDH13Q8NBN7 331 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 RPLP0P6Q8NHW5 317 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 CD101Q93033 1021 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 ATP2A3Q93084 1043 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 LRRC27Q9C0I9 530 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 ZSCAN16Q9H4T2 348 aaPredicted RBP25.67■■□□□ 1.7
LEMD3-203ENST00000541171 CRTAC1Q9NQ79 661 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 GCNT4Q9P109 453 aa25.67■■□□□ 1.7
LEMD3-203ENST00000541171 MORC2Q9Y6X9 1032 aaPredicted RBP25.67■■□□□ 1.7
LEMD3-203ENST00000541171 CCDC163A0A0D9SF12 145 aa25.66■■□□□ 1.7
LEMD3-203ENST00000541171 FOXD2O60548 495 aaPredicted RBP25.66■■□□□ 1.7
LEMD3-203ENST00000541171 USP4Q13107 963 aa25.66■■□□□ 1.7
LEMD3-203ENST00000541171 EML3Q32P44 896 aa25.66■■□□□ 1.7
LEMD3-203ENST00000541171 FBXO43Q4G163 708 aa25.66■■□□□ 1.7
LEMD3-203ENST00000541171 C12orf50Q8NA57 414 aaPredicted RBP25.66■■□□□ 1.7
LEMD3-203ENST00000541171 TNMDQ9H2S6 317 aa25.66■■□□□ 1.7
LEMD3-203ENST00000541171 LINC00597Q9H2U6 94 aa25.66■■□□□ 1.7
LEMD3-203ENST00000541171 TFIP11Q9UBB9 837 aaKnown RBP25.66■■□□□ 1.7
LEMD3-203ENST00000541171 TPRP12270 2363 aaKnown RBP25.65■■□□□ 1.7
LEMD3-203ENST00000541171 STX6O43752 255 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 ADRB1P08588 477 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 HOXD13P35453 343 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 NASPP49321 788 aaPredicted RBP25.65■■□□□ 1.7
LEMD3-203ENST00000541171 ASIC1P78348 528 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 LIMS2Q7Z4I7 341 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 CAMKK1Q8N5S9 505 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 LINC00301Q8NCQ3 95 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 EZH1Q92800 747 aaPredicted RBP25.65■■□□□ 1.7
LEMD3-203ENST00000541171 DHX58Q96C10 678 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 INTS4Q96HW7 963 aaKnown RBP25.65■■□□□ 1.7
LEMD3-203ENST00000541171 LOXL4Q96JB6 756 aa25.65■■□□□ 1.7
LEMD3-203ENST00000541171 SPTLC2O15270 562 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 EPN2O95208 641 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 DLATP10515 647 aaKnown RBP25.64■■□□□ 1.7
LEMD3-203ENST00000541171 WARSP23381 471 aaKnown RBP25.64■■□□□ 1.7
LEMD3-203ENST00000541171 ANXA13P27216 316 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 RAP1GAPP47736 663 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 USP46P62068 366 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 NR1H3Q13133 447 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 MAPRE1Q15691 268 aaKnown RBP25.64■■□□□ 1.7
LEMD3-203ENST00000541171 IL31Q6EBC2 164 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 VSTM1Q6UX27 236 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 TRAPPC11Q7Z392 1133 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 WDR49Q8IV35 697 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 SPATA17Q96L03 361 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 TRIM9Q9C026 710 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 SNX25Q9H3E2 840 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 SMOC1Q9H4F8 434 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 KIAA1586Q9HCI6 787 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 KBTBD4Q9NVX7 518 aa25.64■■□□□ 1.7
LEMD3-203ENST00000541171 CLIC2O15247 247 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 CST3P01034 146 aaPredicted RBP25.63■■□□□ 1.69
LEMD3-203ENST00000541171 TNNI1P19237 187 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 E2F4Q16254 413 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 MDH1BQ5I0G3 518 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 DENND5BQ6ZUT9 1274 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 PCED1BQ96HM7 432 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 MRPL45Q9BRJ2 306 aaKnown RBP25.63■■□□□ 1.69
LEMD3-203ENST00000541171 RXFP3Q9NSD7 469 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 TRPM5Q9NZQ8 1165 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 ARHGAP26Q9UNA1 814 aa25.63■■□□□ 1.69
LEMD3-203ENST00000541171 ZNF806P0C7X5 589 aa25.62■■□□□ 1.69
LEMD3-203ENST00000541171 GNL1P36915 607 aaPredicted RBP25.62■■□□□ 1.69
LEMD3-203ENST00000541171 CYP2J2P51589 502 aa25.62■■□□□ 1.69
LEMD3-203ENST00000541171 AMPD3Q01432 767 aa25.62■■□□□ 1.69
LEMD3-203ENST00000541171 DMC1Q14565 340 aa25.62■■□□□ 1.69
LEMD3-203ENST00000541171 SNRNP35Q16560 246 aaKnown RBP25.62■■□□□ 1.69
LEMD3-203ENST00000541171 SYT13Q7L8C5 426 aa25.62■■□□□ 1.69
LEMD3-203ENST00000541171 HS2ST1Q7LGA3 356 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms