RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 RTN4Q9NQC3 1192 aaKnown RBP19.92■□□□□ 0.78
VPS33A-205ENST00000541169 CEP72Q9P209 647 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 HMGXB4Q9UGU5 601 aa19.92■□□□□ 0.78
VPS33A-205ENST00000541169 A0A1W2PQC6 194 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 MED7O43513 233 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 RHOP08100 348 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 UCHL3P15374 230 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 ATF6P18850 670 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 FSHRP23945 695 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 CDC25CP30307 473 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 KCNQ1P51787 676 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 KCNMA1Q12791 1236 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 ZNF394Q53GI3 561 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 GRASPQ7Z6J2 395 aaPredicted RBP19.91■□□□□ 0.78
VPS33A-205ENST00000541169 SCN4BQ8IWT1 228 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 TTC9BQ8N6N2 239 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 RBBP8NLQ8NC74 664 aaPredicted RBP19.91■□□□□ 0.78
VPS33A-205ENST00000541169 SLC2A14Q8TDB8 520 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 SHC3Q92529 594 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 KREMEN1Q96MU8 473 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 GCNAQ96QF7 691 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 TWNKQ96RR1 684 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 CORO1BQ9BR76 489 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 SIX2Q9NPC8 291 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 DNMT3BQ9UBC3 853 aaKnown RBP19.91■□□□□ 0.78
VPS33A-205ENST00000541169 HESX1Q9UBX0 185 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 DNAJC12Q9UKB3 198 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 C2orf16Q68DN1 1984 aa19.91■□□□□ 0.78
VPS33A-205ENST00000541169 A0A1B0GTH6 734 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 RTN3O95197 1032 aaPredicted RBP19.9■□□□□ 0.78
VPS33A-205ENST00000541169 KRT5P13647 590 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 ZNF132P52740 706 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 DENND5BQ6ZUT9 1274 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 C12orf29Q8N999 325 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 ANKRD52Q8NB46 1076 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 NEK11Q8NG66 645 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 IQCDQ96DY2 449 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 PCMTD1Q96MG8 357 aaPredicted RBP19.9■□□□□ 0.78
VPS33A-205ENST00000541169 STK33Q9BYT3 514 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 ZNF518BQ9C0D4 1074 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 POMKQ9H5K3 350 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 FAM49BQ9NUQ9 324 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 GDE1Q9NZC3 331 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 DENND4AQ7Z401 1863 aa19.9■□□□□ 0.78
VPS33A-205ENST00000541169 EYSQ5T1H1 3165 aa19.89■□□□□ 0.78
VPS33A-205ENST00000541169 AP1G2O75843 785 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 NOL4O94818 638 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 IL9P15248 144 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 CD19P15391 556 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 NPR3P17342 541 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 PTK2Q05397 1052 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 CNGA2Q16280 664 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 DDR2Q16832 855 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 PAQR9Q6ZVX9 377 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 LSM14BQ9BX40 385 aaKnown RBP19.89■□□□□ 0.77
VPS33A-205ENST00000541169 DUSP16Q9BY84 665 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 FBXO44Q9H4M3 255 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 KRT82Q9NSB4 513 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 SIK3Q9Y2K2 1263 aa19.89■□□□□ 0.77
VPS33A-205ENST00000541169 MRPS23Q9Y3D9 190 aaKnown RBP19.89■□□□□ 0.77
VPS33A-205ENST00000541169 SLC38A8A6NNN8 435 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 F8VP50 259 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 CCDC130P13994 396 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 DDX6P26196 483 aaKnown RBP eCLIP19.88■□□□□ 0.77
VPS33A-205ENST00000541169 BCAT1P54687 386 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 UBASH3AP57075 661 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 FANCCQ00597 558 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 SYCP1Q15431 976 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 ARHGAP15Q53QZ3 475 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 PPP1R26Q5T8A7 1209 aaPredicted RBP19.88■□□□□ 0.77
VPS33A-205ENST00000541169 DPY19L2P1Q6NXN4 242 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 LCLAT1Q6UWP7 414 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 ZDHHC14Q8IZN3 488 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 NUP93Q8N1F7 819 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 TDRD5Q8NAT2 981 aaKnown RBP19.88■□□□□ 0.77
VPS33A-205ENST00000541169 OVCA2Q8WZ82 227 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 KAT5Q92993 513 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 NXPE3Q969Y0 559 aa19.88■□□□□ 0.77
VPS33A-205ENST00000541169 NAA15Q9BXJ9 866 aaKnown RBP19.88■□□□□ 0.77
VPS33A-205ENST00000541169 CLDN5O00501 218 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 CBFA2T2O43439 604 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 SOAT2O75908 522 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 CCDC172P0C7W6 258 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 SETSIPP0DME0 302 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 PFKLP17858 780 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 PDE6CP51160 858 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 ZP2Q05996 745 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 ORC1Q13415 861 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 RAPGEF1Q13905 1077 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 NR1I3Q14994 352 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 ARHGAP44Q17R89 818 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 FAM71AQ8IYT1 594 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 PDZD8Q8NEN9 1154 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 SLITRK1Q96PX8 696 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 LPIN3Q9BQK8 851 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 NUP58Q9BVL2 599 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 TTLL2Q9BWV7 592 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 LRRC3Q9BY71 257 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 EDEM3Q9BZQ6 932 aa19.87■□□□□ 0.77
VPS33A-205ENST00000541169 FAM207AQ9NSI2 230 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms