RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	WDR4	P57081	412 aa	Known RBP	5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	DLG4	P78352	724 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SETDB1	Q15047	1291 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	MTFR1	Q15390	333 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RAB30	Q15771	203 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SGO2	Q562F6	1265 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RFWD3	Q6PCD5	774 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ABHD15	Q6UXT9	468 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	LRRC8D	Q7L1W4	858 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	EPM2AIP1	Q7L775	607 aa	Predicted RBP	5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ARHGEF19	Q8IW93	802 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	C4orf33	Q8N1A6	199 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	DNAJC5G	Q8N7S2	189 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	DTX3L	Q8TDB6	740 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	USP6NL	Q92738	828 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	APOL6	Q9BWW8	343 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	ANKFY1	Q9P2R3	1169 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	OGDHL	Q9ULD0	1010 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	SSX2IP	Q9Y2D8	614 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	C2CD2	Q9Y426	696 aa		5.96	□□□□□ -1.45
RAPGEF4-215	ENST00000540783	RASA4B	C9J798	803 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	POC1B-GALNT4	F8VUJ3	575 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RASA4	O43374	803 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	F2	P00734	622 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	AP3M2	P53677	418 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MUM1	Q2TAK8	710 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PPP1R15B	Q5SWA1	713 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	HYI	Q5T013	277 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MFSD5	Q6N075	450 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	LMNTD2	Q8IXW0	634 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SYT2	Q8N9I0	419 aa	Predicted RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PHC3	Q8NDX5	983 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	STK32A	Q8WU08	396 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MBOAT7	Q96N66	472 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RUNDC3B	Q96NL0	473 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	LRRC37B	Q96QE4	947 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RAB3IP	Q96QF0	476 aa	Predicted RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MSTO1	Q9BUK6	570 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TMEM109	Q9BVC6	243 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	R3HDML	Q9H3Y0	253 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DENND2D	Q9H6A0	471 aa	Predicted RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CHST12	Q9NRB3	414 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ETAA1	Q9NY74	926 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	EML1	O00423	815 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TTC4	O95801	387 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CCNB1	P14635	433 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PECAM1	P16284	738 aa	Predicted RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GJC1	P36383	396 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GCLM	P48507	274 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GPC5	P78333	572 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PURA	Q00577	322 aa	Known RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MYL7	Q01449	175 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ELAVL2	Q12926	359 aa	Known RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	EPC2	Q52LR7	807 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TAPT1	Q6NXT6	567 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CCDC62	Q6P9F0	684 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TRMT10C	Q7L0Y3	403 aa	Known RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TTC39C	Q8N584	583 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DNAJB3	Q8WWF6	145 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DNAJC9	Q8WXX5	260 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	BORCS6	Q96GS4	357 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SERPINB12	Q96P63	405 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	HERPUD2	Q9BSE4	406 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SYT11	Q9BT88	431 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	COLEC11	Q9BWP8	271 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ROPN1B	Q9BZX4	212 aa	Predicted RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	C12orf65	Q9H3J6	166 aa	Known RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ROPN1	Q9HAT0	212 aa	Predicted RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ALG13	Q9NP73	1137 aa	Known RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TXLNG	Q9NUQ3	528 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	NINJ2	Q9NZG7	142 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	APEX2	Q9UBZ4	518 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	GTF2IRD1	Q9UHL9	959 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DCTN4	Q9UJW0	460 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PHTF1	Q9UMS5	762 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	LRRC42	Q9Y546	428 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PCDHB12	Q9Y5F1	795 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SQOR	Q9Y6N5	450 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	PSME4	Q14997	1843 aa		5.96	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ATP8B3	O60423	1300 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783		O00370	1275 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	T-ENOL	P0DO92	83 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MAPT	P10636	758 aa	Known RBP	5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	TNNI1	P19237	187 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CLCN3	P51790	818 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	RWDD2B	P57060	319 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	OVGP1	Q12889	678 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MTM1	Q13496	603 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SIX1	Q15475	284 aa	Predicted RBP	5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CCDC6	Q16204	474 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	HSDL1	Q3SXM5	330 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	KHDC1	Q4VXA5	237 aa	Known RBP	5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	LLGL2	Q6P1M3	1020 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	MTHFD1L	Q6UB35	978 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	SLC39A5	Q6ZMH5	540 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	ARHGEF18	Q6ZSZ5	1173 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	DEFB128	Q7Z7B8	93 aa		5.95	□□□□□ -1.46
RAPGEF4-215	ENST00000540783	CROCCP2	Q86T23	111 aa		5.95	□□□□□ -1.46

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