RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 FAM102AQ5T9C2 384 aaPredicted RBP25.88■■□□□ 1.73
TTC3-225ENST00000540756 OR6B2Q6IFH4 312 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 COLGALT2Q8IYK4 626 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 MSANTD4Q8NCY6 345 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 RSPH1Q8WYR4 309 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 TOX2Q96NM4 488 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 SLC4A5Q9BY07 1137 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 PCDHB7Q9Y5E2 793 aa25.88■■□□□ 1.73
TTC3-225ENST00000540756 H2AFXP16104 143 aaPredicted RBP25.87■■□□□ 1.73
TTC3-225ENST00000540756 GJC1P36383 396 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 SLC7A5Q01650 507 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 ATP13A4Q4VNC1 1196 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 TRNP1Q6NT89 227 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 TMEM86AQ8N2M4 240 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.87■■□□□ 1.73
TTC3-225ENST00000540756 IPO4Q8TEX9 1081 aaKnown RBP25.87■■□□□ 1.73
TTC3-225ENST00000540756 LHX1P48742 406 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 RWDD2BP57060 319 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 RNASELQ05823 741 aaKnown RBP25.87■■□□□ 1.73
TTC3-225ENST00000540756 BST2Q10589 180 aaKnown RBP25.87■■□□□ 1.73
TTC3-225ENST00000540756 LONRF2Q1L5Z9 754 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 TXNRD3NBQ6F5E7 133 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 DCLRE1AQ6PJP8 1040 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 TMEM110Q86TL2 294 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 KLHL7Q8IXQ5 586 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 ZDHHC14Q8IZN3 488 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 ARFGAP1Q8N6T3 406 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 URGCPQ8TCY9 931 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 CLEC4CQ8WTT0 213 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 VWCEQ96DN2 955 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 UROC1Q96N76 676 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 KRT12Q99456 494 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 SYT15Q9BQS2 421 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 MIS12Q9H081 205 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 WDR35Q9P2L0 1181 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 TBX21Q9UL17 535 aa25.87■■□□□ 1.73
TTC3-225ENST00000540756 PRG3Q9Y2Y8 225 aaPredicted RBP25.87■■□□□ 1.73
TTC3-225ENST00000540756 TCRBV7S2A1N4TA0A589 114 aa25.86■■□□□ 1.73
TTC3-225ENST00000540756 PAPSS1O43252 624 aaPredicted RBP25.86■■□□□ 1.73
TTC3-225ENST00000540756 CXCL10P02778 98 aa25.86■■□□□ 1.73
TTC3-225ENST00000540756 FAM163BP0C2L3 166 aa25.86■■□□□ 1.73
TTC3-225ENST00000540756 OR1G1P47890 313 aa25.86■■□□□ 1.73
TTC3-225ENST00000540756 BCAT1P54687 386 aa25.86■■□□□ 1.73
TTC3-225ENST00000540756 LRRC26Q2I0M4 334 aa25.86■■□□□ 1.73
TTC3-225ENST00000540756 CC2D1AQ6P1N0 951 aaPredicted RBP25.86■■□□□ 1.73
TTC3-225ENST00000540756 CRIPAKQ8N1N5 446 aa25.86■■□□□ 1.73
TTC3-225ENST00000540756 HNRNPABQ99729 332 aaKnown RBP25.86■■□□□ 1.73
TTC3-225ENST00000540756 KLHL11Q9NVR0 708 aa25.86■■□□□ 1.73
TTC3-225ENST00000540756 TTC7AQ9ULT0 858 aaPredicted RBP25.86■■□□□ 1.73
TTC3-225ENST00000540756 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.86■■□□□ 1.73
TTC3-225ENST00000540756 M0QZQ0 153 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 KRIT1O00522 736 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 ODC1P11926 461 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 PSMA2P25787 234 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 TAP1Q03518 808 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 CASD1Q96PB1 797 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 TMEM209Q96SK2 561 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 VSNL1P62760 191 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 C1orf53Q5VUE5 145 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 OLFML1Q6UWY5 402 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 APBB2Q92870 758 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 PCED1BQ96HM7 432 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 ELAC1Q9H777 363 aaKnown RBP25.85■■□□□ 1.73
TTC3-225ENST00000540756 TMEM30AQ9NV96 361 aa25.85■■□□□ 1.73
TTC3-225ENST00000540756 DMGDHQ9UI17 866 aaKnown RBP25.85■■□□□ 1.73
TTC3-225ENST00000540756 SETSIPP0DME0 302 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 LCP1P13796 627 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 MAN1A1P33908 653 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 CACNA2D1P54289 1103 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 TUBB4BP68371 445 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 RAB6CQ53S08 254 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 ANKS1BQ7Z6G8 1248 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 KHSRPQ92945 711 aaKnown RBP eCLIP25.84■■□□□ 1.734e-7■■■□□ 15.5
TTC3-225ENST00000540756 ACSF2Q96CM8 615 aaPredicted RBP25.84■■□□□ 1.73
TTC3-225ENST00000540756 HERPUD2Q9BSE4 406 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 RHOBTB2Q9BYZ6 727 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 RAB6CQ9H0N0 254 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 DDX47Q9H0S4 455 aaKnown RBP25.84■■□□□ 1.73
TTC3-225ENST00000540756 TMEM39AQ9NV64 488 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 MICAL3Q7RTP6 2002 aa25.84■■□□□ 1.73
TTC3-225ENST00000540756 ITGB8P26012 769 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 FLT3P36888 993 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 CLCN6P51797 869 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 SH3PXD2AQ5TCZ1 1133 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.83■■□□□ 1.734e-10■■■■■ 31.1
TTC3-225ENST00000540756 ABI1Q8IZP0 508 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 OR10T2Q8NGX3 314 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 NDRG1Q92597 394 aaKnown RBP25.83■■□□□ 1.73
TTC3-225ENST00000540756 SUSD3Q96L08 255 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 MED10Q9BTT4 135 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 DUSP16Q9BY84 665 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 CYP11A1P05108 521 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 BCAR1P56945 870 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 PIGHQ14442 188 aaPredicted RBP25.83■■□□□ 1.73
TTC3-225ENST00000540756 PIGZQ86VD9 579 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 RHOT1Q8IXI2 618 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 STK32AQ8WU08 396 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 NRDE2Q9H7Z3 1164 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 KANSL3Q9P2N6 904 aa25.83■■□□□ 1.73
TTC3-225ENST00000540756 LRFN2Q9ULH4 789 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms