RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 DNMT3BQ9UBC3 853 aaKnown RBP12.22□□□□□ -0.45
TMEM258-205ENST00000540434 HOOK1Q9UJC3 728 aaKnown RBP12.22□□□□□ -0.45
TMEM258-205ENST00000540434 NDRG2Q9UN36 371 aaKnown RBP12.22□□□□□ -0.45
TMEM258-205ENST00000540434 DMXL2Q8TDJ6 3036 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 ITPR1Q14643 2758 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 SPAG17Q6Q759 2223 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 COL4A2P08572 1712 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 MYBPHLA2RUH7 354 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 MTMR11A4FU01 709 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 AXIN1O15169 862 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 MAPK13O15264 365 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 KIF20AO95235 890 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 HLA-DRAP01903 254 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 CPB1P15086 417 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 PNPLA4P41247 253 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 RAP1GAPP47736 663 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 PFKPQ01813 784 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 CREMQ03060 361 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 WDR72Q3MJ13 1102 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 SLC39A12Q504Y0 691 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 MTSS1LQ765P7 747 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 USP37Q86T82 979 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 IRF2BP1Q8IU81 584 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 TCEAL8Q8IYN2 117 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 HS6ST3Q8IZP7 471 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 STKLD1Q8NE28 680 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 ITFG1Q8TB96 612 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 TAS1R2Q8TE23 839 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 ZNF560Q96MR9 790 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 PLA2G2FQ9BZM2 168 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 DNAJC25Q9H1X3 360 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 DPEP3Q9H4B8 488 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 SMYD3Q9H7B4 428 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 CYP4F11Q9HBI6 524 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 DDX43Q9NXZ2 648 aaKnown RBP12.21□□□□□ -0.45
TMEM258-205ENST00000540434 AFF4Q9UHB7 1163 aaKnown RBP12.21□□□□□ -0.45
TMEM258-205ENST00000540434 FRMD4BQ9Y2L6 1034 aa12.21□□□□□ -0.45
TMEM258-205ENST00000540434 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.21□□□□□ -0.45
TMEM258-205ENST00000540434 ARHGEF37A1IGU5 675 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 OR6C75A6NL08 312 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 IKBKBO14920 756 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 CETN3O15182 167 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 NCAM2O15394 837 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 HUS1O60921 280 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 PDGFRBP09619 1106 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 RPL13P26373 211 aaKnown RBP12.2□□□□□ -0.46
TMEM258-205ENST00000540434 CCR2P41597 374 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 GPR15P49685 360 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 FKBP3Q00688 224 aaKnown RBP12.2□□□□□ -0.46
TMEM258-205ENST00000540434 SATB1Q01826 763 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 BIRC3Q13489 604 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 NCOA4Q13772 614 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 SLC5A9Q2M3M2 681 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 DPCR1Q3MIW9 517 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 CBWD6Q4V339 395 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 CBWD3Q5JTY5 395 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 CBWD5Q5RIA9 395 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 PPM1LQ5SGD2 360 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 STPG1Q5TH74 334 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 FAM160A2Q8N612 972 aaPredicted RBP12.2□□□□□ -0.46
TMEM258-205ENST00000540434 TOP6BLQ8N6T0 577 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 TCEAL4Q96EI5 215 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 GBP4Q96PP9 640 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 ADAM33Q9BZ11 813 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 NUP62CLQ9H1M0 184 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 ARRDC1-AS1Q9H2J1 176 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 CRTAC1Q9NQ79 661 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
TMEM258-205ENST00000540434 GTF3C4Q9UKN8 822 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 WASF3Q9UPY6 502 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 INSL5Q9Y5Q6 135 aa12.2□□□□□ -0.46
TMEM258-205ENST00000540434 TICRRQ7Z2Z1 1910 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 PHACTR2O75167 634 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 MOSPD3O75425 235 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 STAU1O95793 577 aaKnown RBP12.19□□□□□ -0.46
TMEM258-205ENST00000540434 PAX3P23760 479 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 LIMK1P53667 647 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 NRLP54845 237 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 PSMC1P62191 440 aaKnown RBP12.19□□□□□ -0.46
TMEM258-205ENST00000540434 LRRC63Q05C16 580 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 TWF1Q12792 350 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 ORC1Q13415 861 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 TRPC3Q13507 836 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 UVSSAQ2YD98 709 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 SDHAF4Q5VUM1 108 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 TPGS2Q68CL5 300 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 HEATR6Q6AI08 1181 aaKnown RBP12.19□□□□□ -0.46
TMEM258-205ENST00000540434 SCARA5Q6ZMJ2 495 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 ZNF852Q6ZMS4 543 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 RBM43Q6ZSC3 357 aaKnown RBP12.19□□□□□ -0.46
TMEM258-205ENST00000540434 INTS8Q75QN2 995 aaKnown RBP12.19□□□□□ -0.46
TMEM258-205ENST00000540434 METTL23Q86XA0 190 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 ADGRF2Q8IZF7 708 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 ZCCHC14Q8WYQ9 949 aaKnown RBP12.19□□□□□ -0.46
TMEM258-205ENST00000540434 GATA6Q92908 595 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 TATDN2Q93075 761 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 SLC35C1Q96A29 364 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 MMS19Q96T76 1030 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 MKNK1Q9BUB5 465 aa12.19□□□□□ -0.46
TMEM258-205ENST00000540434 LSM14BQ9BX40 385 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms