RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 LURAP1LQ8IV03 231 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 ADGRF4Q8IZF3 695 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 LRRC43Q8N309 656 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 KBTBD3Q8NAB2 608 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 ZCCHC14Q8WYQ9 949 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 STAMQ92783 540 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 RNF34Q969K3 372 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 CLDN23Q96B33 292 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 INPP4AQ96PE3 977 aaPredicted RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 SEC62Q99442 399 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 LSM14BQ9BX40 385 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 FAM126AQ9BYI3 521 aaPredicted RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 KLHL25Q9H0H3 589 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 IGSF5Q9NSI5 407 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 TCP11L1Q9NUJ3 509 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 ERAP1Q9NZ08 941 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 DMXL2Q8TDJ6 3036 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 WDFY3Q8IZQ1 3526 aa4.47□□□□□ -1.69
C2CD3-214ENST00000540057 GCN1Q92616 2671 aaKnown RBP4.47□□□□□ -1.69
C2CD3-214ENST00000540057 EVPLQ92817 2033 aa4.46□□□□□ -1.69
C2CD3-214ENST00000540057 DOCK6Q96HP0 2047 aa4.46□□□□□ -1.69
C2CD3-214ENST00000540057 FLNBO75369 2602 aaKnown RBP4.46□□□□□ -1.69
C2CD3-214ENST00000540057 SMIM35A0A1B0GVV1 85 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 GSTTP1A0A1W2PQM5 241 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 RRN3P2A6NIE6 340 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 SHISA7A6NL88 538 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 INPPL1O15357 1258 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 FIBPO43427 364 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 ORC4O43929 436 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 RPS6KA5O75582 802 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 FGRP09769 529 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 INSRRP14616 1297 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 ATF2P15336 505 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 RPS9P46781 194 aaKnown RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 SOX9P48436 509 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 ALDH7A1P49419 539 aaKnown RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 POLGP54098 1239 aaPredicted RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 MTAPQ13126 283 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 SRSF5Q13243 272 aaKnown RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 SIM2Q14190 667 aaPredicted RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 PLCB4Q15147 1175 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 SF3A2Q15428 464 aaKnown RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 GNPTABQ3T906 1256 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 AASDHQ4L235 1098 aaPredicted RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 CLLU1OSQ5K130 101 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 ZBTB41Q5SVQ8 909 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 TMCO4Q5TGY1 634 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 STPG1Q5TH74 334 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 PARM1Q6UWI2 310 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 RSPO2Q6UXX9 243 aaPredicted RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 DDX53Q86TM3 631 aaKnown RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 JAMLQ86YT9 394 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 CMASQ8NFW8 434 aaPredicted RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 TRAPPC12Q8WVT3 735 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 FGF14Q92915 247 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 TMEM169Q96HH4 297 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 TTC14Q96N46 770 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 BBC3Q96PG8 261 aaPredicted RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 KLHL5Q96PQ7 755 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 RHOBTB2Q9BYZ6 727 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 MAP3K20Q9NYL2 800 aaKnown RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 ANKFY1Q9P2R3 1169 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 ANAPC4Q9UJX5 808 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 ST3GAL5Q9UNP4 418 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 GINS2Q9Y248 185 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 SF3B6Q9Y3B4 125 aaKnown RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 PCDHA2Q9Y5H9 948 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 PCDHA1Q9Y5I3 950 aa4.46□□□□□ -1.7
C2CD3-214ENST00000540057 MTCL1Q9Y4B5 1905 aaKnown RBP4.46□□□□□ -1.7
C2CD3-214ENST00000540057 TICRRQ7Z2Z1 1910 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 A0A1W2PQH9 124 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 AURKAO14965 403 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 NCAM2O15394 837 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 PPP1R11O60927 126 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ATP9AO75110 1047 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 RAB11FIP3O75154 756 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 RFPL2O75678 378 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 STAM2O75886 525 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ZFYP08048 801 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 CNPP09543 421 aaKnown RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 GLI4P10075 376 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 MYBP10242 640 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 VAMP1P23763 118 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 KLRC2P26717 231 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 NOP2P46087 812 aaKnown RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 GIPRP48546 466 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 POU4F1Q01851 419 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 RRP12Q5JTH9 1297 aaKnown RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ODR4Q5SWX8 454 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ZKSCAN2Q63HK3 967 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 BICRALQ6AI39 1079 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 CYP26C1Q6V0L0 522 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 TPRG1Q6ZUI0 275 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 GET4Q7L5D6 327 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.45□□□□□ -1.7
C2CD3-214ENST00000540057 FAM228AQ86W67 206 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ECHDC2Q86YB7 292 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 ITPRIPQ8IWB1 547 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 NME8Q8N427 588 aa4.45□□□□□ -1.7
C2CD3-214ENST00000540057 SAMD3Q8N6K7 520 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms