RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 SLFN12LQ6IEE8 588 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 RAPH1Q70E73 1250 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 ZBTB8OSQ8IWT0 167 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 GALNT4Q8N4A0 578 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 C12orf50Q8NA57 414 aaPredicted RBP13.53□□□□□ -0.24
MSH6-210ENST00000540021 LMO3Q8TAP4 145 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 AGO4Q9HCK5 861 aaKnown RBP13.53□□□□□ -0.24
MSH6-210ENST00000540021 AVENQ9NQS1 362 aaPredicted RBP13.53□□□□□ -0.24
MSH6-210ENST00000540021 SAR1AQ9NR31 198 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.53□□□□□ -0.24
MSH6-210ENST00000540021 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 AHCYL1O43865 530 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 DGAT1O75907 488 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 FDX1P10109 184 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 GCNT1Q02742 428 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 DGKZQ13574 1117 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 CYTH1Q15438 398 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 ZNF667Q5HYK9 610 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 RINLQ6ZS11 566 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 KCTD17Q8N5Z5 321 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 TMEM161BQ8NDZ6 487 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 UBA3Q8TBC4 463 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 ANKRD36BP1Q96IX9 119 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 MIS12Q9H081 205 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 SRCAPQ6ZRS2 3230 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 A6NJR5 290 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 E7ENQ6 273 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 AIM2O14862 343 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 SLC25A3Q00325 362 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 GTF2BQ00403 316 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 SNRNP48Q6IEG0 339 aaKnown RBP13.53□□□□□ -0.24
MSH6-210ENST00000540021 NLGN1Q8N2Q7 840 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 B4GALNT2Q8NHY0 566 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 FAM149B1Q96BN6 582 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 MBOAT7Q96N66 472 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 PDP2Q9P2J9 529 aa13.53□□□□□ -0.24
MSH6-210ENST00000540021 CCNB1P14635 433 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 GSTT1P30711 240 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 RAP1GAPP47736 663 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 HADHBP55084 474 aaKnown RBP13.52□□□□□ -0.24
MSH6-210ENST00000540021 MYL6P60660 151 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 YWHAEP62258 255 aaKnown RBP13.52□□□□□ -0.24
MSH6-210ENST00000540021 RPL10AP62906 217 aaKnown RBP13.52□□□□□ -0.24
MSH6-210ENST00000540021 SPP2Q13103 211 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 ACVR2BQ13705 512 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 DNAL1Q4LDG9 190 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 STRIP1Q5VSL9 837 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 NPNTQ6UXI9 565 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 ALLCQ8N6M5 410 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 TMC2Q8TDI7 906 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 C10orf82Q8WW14 230 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 USP6NLQ92738 828 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 PPWD1Q96BP3 646 aaKnown RBP13.52□□□□□ -0.24
MSH6-210ENST00000540021 MASTLQ96GX5 879 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 HIC2Q96JB3 615 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 Q9H521 79 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 LGALS13Q9UHV8 139 aa13.52□□□□□ -0.24
MSH6-210ENST00000540021 FAF1Q9UNN5 650 aaPredicted RBP13.52□□□□□ -0.24
MSH6-210ENST00000540021 TBX10O75333 385 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 LDHAP00338 332 aaKnown RBP13.52□□□□□ -0.25
MSH6-210ENST00000540021 RPL22P35268 128 aaKnown RBP13.52□□□□□ -0.25
MSH6-210ENST00000540021 PPP1R15BQ5SWA1 713 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 CGB2Q6NT52 195 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 C16orf46Q6P387 395 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 RIPOR1Q6ZS17 1223 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 DNAAF3Q8N9W5 541 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 ANKRD27Q96NW4 1050 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 JPH1Q9HDC5 661 aaPredicted RBP13.52□□□□□ -0.25
MSH6-210ENST00000540021 HERC5Q9UII4 1024 aaKnown RBP13.52□□□□□ -0.25
MSH6-210ENST00000540021 INPP5FQ9Y2H2 1132 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 TM9SF1O15321 606 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 DNAJC6O75061 913 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 CSDE1O75534 798 aaKnown RBP13.52□□□□□ -0.25
MSH6-210ENST00000540021 ZMPSTE24O75844 475 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 WFS1O76024 890 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 NR3C2P08235 984 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 PDGFRAP16234 1089 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 AMPD1P23109 780 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 ADSSP30520 456 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 ROR2Q01974 943 aaKnown RBP13.52□□□□□ -0.25
MSH6-210ENST00000540021 UBAP2LQ14157 1087 aaKnown RBP13.52□□□□□ -0.25
MSH6-210ENST00000540021 TFDP2Q14188 446 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 SIX1Q15475 284 aaPredicted RBP13.52□□□□□ -0.25
MSH6-210ENST00000540021 FNBP1LQ5T0N5 605 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 CDAN1Q8IWY9 1227 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 CD101Q93033 1021 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 STRIP2Q9ULQ0 834 aa13.52□□□□□ -0.25
MSH6-210ENST00000540021 SLIT2O94813 1529 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 MYH11P35749 1972 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 GSTA2P09210 222 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 TYK2P29597 1187 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 NOMO3P69849 1222 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 CCDC15Q0P6D6 951 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 PDE1CQ14123 709 aaPredicted RBP13.51□□□□□ -0.25
MSH6-210ENST00000540021 EMC2Q15006 297 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 GEN1Q17RS7 908 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 SH2D4BQ5SQS7 431 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 TDRD10Q5VZ19 366 aaKnown RBP13.51□□□□□ -0.25
MSH6-210ENST00000540021 TXNRD3NBQ6F5E7 133 aa13.51□□□□□ -0.25
MSH6-210ENST00000540021 POLNQ7Z5Q5 900 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms