RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 PHLDB3Q6NSJ2 640 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 TTI2Q6NXR4 508 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 RFPL4BQ6ZWI9 263 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 CSGALNACT2Q8N6G5 542 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 NOC3LQ8WTT2 800 aaKnown RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 CLEC4DQ8WXI8 215 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 OSBPL7Q9BZF2 842 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 VPS16Q9H269 839 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 THAP9Q9H5L6 903 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 C12orf4Q9NQ89 552 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 TAB2Q9NYJ8 693 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 BTBD7Q9P203 1132 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 TRIM10Q9UDY6 481 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 DNM3Q9UQ16 869 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 USTQ9Y2C2 406 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 GOLGA8MH3BSY2 632 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 CHMP2AO43633 222 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 HNF1BP35680 557 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 MAP2K5Q13163 448 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 TBX2Q13207 712 aaPredicted RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 ZC3H12BQ5HYM0 836 aaKnown RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 METTL3Q86U44 580 aaKnown RBP13.19□□□□□ -0.3
DDX55-206ENST00000539934 ARRDC4Q8NCT1 418 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 ATP8B4Q8TF62 1192 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 ATG4CQ96DT6 458 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 PNKPQ96T60 521 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 ZNF577Q9BSK1 485 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 PANK4Q9NVE7 773 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 VANGL2Q9ULK5 521 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 COL4A3BPQ9Y5P4 624 aa13.19□□□□□ -0.3
DDX55-206ENST00000539934 CCDC163A0A0D9SF12 145 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 A6NJY4 79 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 HNRNPCL2B2RXH8 293 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 MEIS1O00470 390 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 VWA5AO00534 786 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
DDX55-206ENST00000539934 GAS7O60861 476 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 UPP2O95045 317 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 FAM107AO95990 144 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 TBXAS1P24557 533 aaPredicted RBP13.18□□□□□ -0.3
DDX55-206ENST00000539934 ITGB8P26012 769 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 EEF1GP26641 437 aaKnown RBP13.18□□□□□ -0.3
DDX55-206ENST00000539934 GALNT1Q10472 559 aaPredicted RBP13.18□□□□□ -0.3
DDX55-206ENST00000539934 COASYQ13057 564 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 TRIM60Q495X7 471 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 PRAMEF19Q5SWL8 479 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 ANKRD40Q6AI12 368 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 MILR1Q7Z6M3 343 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 SLC5A5Q92911 643 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 RBM18Q96H35 190 aaKnown RBP13.18□□□□□ -0.3
DDX55-206ENST00000539934 EIF2AK1Q9BQI3 630 aaKnown RBP13.18□□□□□ -0.3
DDX55-206ENST00000539934 GPATCH1Q9BRR8 931 aaKnown RBP13.18□□□□□ -0.3
DDX55-206ENST00000539934 SPATA16Q9BXB7 569 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 VTA1Q9NP79 307 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 CHST12Q9NRB3 414 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 COL20A1Q9P218 1284 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
DDX55-206ENST00000539934 FBP2O00757 339 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 GUCY1B2O75343 617 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 CNMDO75829 334 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 PSMD10O75832 226 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 ZBED1O96006 694 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 LMNAP02545 664 aaKnown RBP13.17□□□□□ -0.3
DDX55-206ENST00000539934 SPATA31C1P0DKV0 1188 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
DDX55-206ENST00000539934 PRKCEQ02156 737 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 RELAQ04206 551 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 RAPGEF1Q13905 1077 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 PTGISQ16647 500 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 HIBCHQ6NVY1 386 aaPredicted RBP13.17□□□□□ -0.3
DDX55-206ENST00000539934 PPP1R21Q6ZMI0 780 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 SLC22A8Q8TCC7 542 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 SUGCTQ9HAC7 445 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 PPP1R14DQ9NXH3 145 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 DLGAP2Q9P1A6 1054 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 DNAJC16Q9Y2G8 782 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 RLFQ13129 1914 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 SNTNA6NMZ2 147 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 EML1O00423 815 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 FANCGO15287 622 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 LILRB3O75022 631 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 ARP10275 920 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 EPB41P11171 864 aaKnown RBP13.17□□□□□ -0.3
DDX55-206ENST00000539934 SLC12A3P55017 1021 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 GABREP78334 506 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 CACNB1Q02641 598 aaPredicted RBP13.17□□□□□ -0.3
DDX55-206ENST00000539934 STILQ15468 1287 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 FBXO43Q4G163 708 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 FAM133BQ5BKY9 247 aaKnown RBP13.17□□□□□ -0.3
DDX55-206ENST00000539934 TJAP1Q5JTD0 557 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 MFSD14CQ5VZR4 134 aa13.17□□□□□ -0.3
DDX55-206ENST00000539934 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms