RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CYP4A22Q5TCH4 519 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 ACOT1Q86TX2 421 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 ADAM2Q99965 735 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 GMNCA6NCL1 334 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 ARL5CA6NH57 179 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 FLT3P36888 993 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 TAF6P49848 677 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 LILRA4P59901 499 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 RPL7AP62424 266 aaKnown RBP18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 ZNF211Q13398 564 aaPredicted RBP18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 MTFR1Q15390 333 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 CNGA2Q16280 664 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 PTPN20Q4JDL3 420 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 DAB2IPQ5VWQ8 1189 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 TRAF7Q6Q0C0 670 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 RASGEF1CQ8N431 466 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 TTC39CQ8N584 583 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 OR6B3Q8NGW1 331 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 UBA3Q8TBC4 463 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 UBLCP1Q8WVY7 318 aaPredicted RBP18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 ZNF560Q96MR9 790 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 MRPL47Q9HD33 250 aaKnown RBP18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 PARVAQ9NVD7 372 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 AMACRQ9UHK6 382 aa18.01■□□□□ 0.47
PCDHB17P-201ENST00000539533 ARVCFO00192 962 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 DAPK3O43293 454 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 CALB1P05937 261 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 PEX5P50542 639 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 MBTPS1Q14703 1052 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 AADACL2Q6P093 401 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 MRPL10Q7Z7H8 261 aaKnown RBP18■□□□□ 0.47
PCDHB17P-201ENST00000539533 HACE1Q8IYU2 909 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 C3orf20Q8ND61 904 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 LPIN3Q9BQK8 851 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 SLITRK6Q9H5Y7 841 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 FAM124BQ9H5Z6 455 aaPredicted RBP18■□□□□ 0.47
PCDHB17P-201ENST00000539533 CD248Q9HCU0 757 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 GDAP2Q9NXN4 497 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 BCCIPQ9P287 314 aaKnown RBP eCLIP18■□□□□ 0.47
PCDHB17P-201ENST00000539533 PHF24Q9UPV7 400 aa18■□□□□ 0.47
PCDHB17P-201ENST00000539533 MIF4GDA9UHW6 222 aaKnown RBP17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 KBTBD13C9JR72 458 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 M0QYV0 167 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 TRAPPC3O43617 180 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 FGFR1P11362 822 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 LRPAP1P30533 357 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 SCNN1GP51170 649 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 AGBL2Q5U5Z8 902 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 CCDC13Q8IYE1 715 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 KBTBD7Q8WVZ9 684 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 CPXM1Q96SM3 734 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 CARD9Q9H257 536 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 TSPYL2Q9H2G4 693 aaPredicted RBP17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 DPEP3Q9H4B8 488 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 SCINQ9Y6U3 715 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 A0A0U1RQF3 1178 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 TCRBV5S1A1TA0A578 114 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 ZNF623O75123 536 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 THP07101 528 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 PDGFRBP09619 1106 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 LMO2P25791 158 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 PNPLA4P41247 253 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 GPD2P43304 727 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 PPARDQ03181 441 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 ODF2Q5BJF6 829 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 TMC3Q7Z5M5 1100 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 UBL4BQ8N7F7 174 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 FEZF2Q8TBJ5 459 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 BEGAINQ9BUH8 593 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 WNT8AQ9H1J5 351 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 TSPAN16Q9UKR8 245 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 PTPN22Q9Y2R2 807 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 GIT1Q9Y2X7 761 aa17.99■□□□□ 0.47
PCDHB17P-201ENST00000539533 A8MXQ7 604 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 PPP2R2AP63151 447 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 KCTD19Q17RG1 926 aaPredicted RBP17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 SV2CQ496J9 727 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 PPP1R26Q5T8A7 1209 aaPredicted RBP17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 GIMAP7Q8NHV1 300 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 CCDC26Q8TAB7 109 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 DEFB118Q96PH6 123 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 TRAIPQ9BWF2 469 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 FAM49BQ9NUQ9 324 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 KIAA1257Q9ULG3 409 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 TTI1O43156 1089 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 KIF1CO43896 1103 aaKnown RBP17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 FGGP02679 453 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 RDXP35241 583 aaKnown RBP17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 LCLAT1Q6UWP7 414 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 APPL2Q8NEU8 664 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 SEC14L1Q92503 715 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 NOVA2Q9UNW9 492 aaKnown RBP17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 PCDHA3Q9Y5H8 950 aa17.98■□□□□ 0.47
PCDHB17P-201ENST00000539533 PROSCO94903 275 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 GNL1P36915 607 aaPredicted RBP17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 CLCNKBP51801 687 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 DNAJC24Q6P3W2 148 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 CCDC121Q6ZUS5 278 aa17.97■□□□□ 0.47
PCDHB17P-201ENST00000539533 RTN4RL1Q86UN2 441 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms