RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 HHATQ5VTY9 493 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 PPP1R2P3Q6NXS1 205 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 ZNF449Q6P9G9 518 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 NCAPG2Q86XI2 1143 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 VSIG1Q86XK7 387 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 IGDCC3Q8IVU1 814 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 NIPA2Q8N8Q9 360 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 GRAMD1AQ96CP6 724 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 PLCD4Q9BRC7 762 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 MINDY3Q9H8M7 445 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 UBN1Q9NPG3 1134 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 CEP83Q9Y592 693 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 INO80B-WBP1J3KQ70 363 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 CBX6O95503 412 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 CDH5P33151 784 aaPredicted RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 PTPN7P35236 360 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 OVGP1Q12889 678 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 EFHC2Q5JST6 749 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 TLDC1Q6P9B6 456 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 CEP128Q6ZU80 1094 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 OTOAQ7RTW8 1153 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 NAT8LQ8N9F0 302 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 LRRN4Q8WUT4 740 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 RSAD2Q8WXG1 361 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 LRRC37BQ96QE4 947 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 PAFAH2Q99487 392 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 TACO1Q9BSH4 297 aaKnown RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 CALN1Q9BXU9 219 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 INO80BQ9C086 356 aaPredicted RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 ZNF518BQ9C0D4 1074 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 SMYD3Q9H7B4 428 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 SYNCQ9H7C4 482 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 SLC17A7Q9P2U7 560 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 SNCAIPQ9Y6H5 919 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 SIGLEC16A6NMB1 481 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 PGK2P07205 417 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 IQCF3P0C7M6 154 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 BASP1P80723 227 aaKnown RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 PLEKHG4Q58EX7 1191 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 RFX6Q8HWS3 928 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 PPIL6Q8IXY8 311 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 KCTD6Q8NC69 237 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 SEPT1Q8WYJ6 367 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 ZNF75CPQ92670 426 aaPredicted RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 ASCC2Q9H1I8 757 aaPredicted RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 EBF2Q9HAK2 575 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 NPHS2Q9NP85 383 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 SIX4Q9UIU6 781 aa12.55□□□□□ -0.4
CPNE8-203ENST00000538596 SMG5Q9UPR3 1016 aaKnown RBP12.55□□□□□ -0.4
CPNE8-203ENST00000538596 NFICP08651 508 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 MIPP30301 263 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 EFNA5P52803 228 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 AP3M2P53677 418 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 RAD23BP54727 409 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 FAM160B1Q5W0V3 765 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 ZC3H18Q86VM9 953 aaKnown RBP12.54□□□□□ -0.4
CPNE8-203ENST00000538596 XYLT1Q86Y38 959 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 C10orf82Q8WW14 230 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 CHMP2BQ9UQN3 213 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 DIAPH2O60879 1101 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 AVILO75366 819 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 T-ENOLP0DO92 83 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 GBP2P32456 591 aaPredicted RBP12.54□□□□□ -0.4
CPNE8-203ENST00000538596 CLCN3P51790 818 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 YARSP54577 528 aaKnown RBP12.54□□□□□ -0.4
CPNE8-203ENST00000538596 ARL4CP56559 192 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 YWHAEP62258 255 aaKnown RBP12.54□□□□□ -0.4
CPNE8-203ENST00000538596 TAP1Q03518 808 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 ATF7IP2Q5U623 682 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 CDCA2Q69YH5 1023 aaPredicted RBP12.54□□□□□ -0.4
CPNE8-203ENST00000538596 BBS12Q6ZW61 710 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 POLNQ7Z5Q5 900 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 CHST13Q8NET6 341 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 TCP10LQ8TDR4 215 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 COPS5Q92905 334 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 PEBP4Q96S96 227 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 SLC24A2Q9UI40 661 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 XPO7Q9UIA9 1087 aaKnown RBP12.54□□□□□ -0.4
CPNE8-203ENST00000538596 DCTN4Q9UJW0 460 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 USH1CQ9Y6N9 552 aa12.54□□□□□ -0.4
CPNE8-203ENST00000538596 EVPLQ92817 2033 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 BRCA1P38398 1863 aaKnown RBP12.53□□□□□ -0.4
CPNE8-203ENST00000538596 SSC5DA1L4H1 1573 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 GRAP2O75791 330 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 MAP3K6O95382 1288 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 TNNC2P02585 160 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 CDC25CP30307 473 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 EIF3EP60228 445 aaKnown RBP12.53□□□□□ -0.4
CPNE8-203ENST00000538596 CCDC15Q0P6D6 951 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 IER5Q5VY09 327 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 ZBTB8OSQ8IWT0 167 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 C1orf127Q8N9H9 656 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 UBA3Q8TBC4 463 aa12.53□□□□□ -0.4
CPNE8-203ENST00000538596 KCNV2Q8TDN2 545 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms