RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 STK32AQ8WU08 396 aa20.58■□□□□ 0.89
EFCAB11-202ENST00000538485 B3GALT6Q96L58 329 aa20.58■□□□□ 0.89
EFCAB11-202ENST00000538485 PKMYT1Q99640 499 aa20.58■□□□□ 0.89
EFCAB11-202ENST00000538485 SLC4A5Q9BY07 1137 aa20.58■□□□□ 0.89
EFCAB11-202ENST00000538485 DUSP16Q9BY84 665 aa20.58■□□□□ 0.89
EFCAB11-202ENST00000538485 SNX12Q9UMY4 172 aa20.58■□□□□ 0.89
EFCAB11-202ENST00000538485 LAMA3Q16787 3333 aa20.58■□□□□ 0.89
EFCAB11-202ENST00000538485 SF3B1O75533 1304 aaKnown RBP eCLIP20.58■□□□□ 0.881e-6■■■■■ 114.9
EFCAB11-202ENST00000538485 GABBR2O75899 941 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 BEST1O76090 585 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 GSCP56915 257 aaPredicted RBP20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 DNAJC24Q6P3W2 148 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 FUT10Q6P4F1 479 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 TMEM110Q86TL2 294 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 CEP57Q86XR8 500 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 IPO4Q8TEX9 1081 aaKnown RBP20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 PSMB7Q99436 277 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 MED10Q9BTT4 135 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 TMLHEQ9NVH6 421 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 CDC23Q9UJX2 597 aa20.58■□□□□ 0.88
EFCAB11-202ENST00000538485 TMEM110-MUSTN1A8MSY1 372 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 ZBBXA8MT70 800 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 GOLGA8SH3BPF8 625 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 MYO1FO00160 1098 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 NPR3P17342 541 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 DNA2P51530 1060 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 ZNF268Q14587 947 aaPredicted RBP20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 VARS2Q5ST30 1063 aaKnown RBP20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 CLEC20AQ6ZU45 233 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 FEZF2Q8TBJ5 459 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 MCEEQ96PE7 176 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 WDR35Q9P2L0 1181 aa20.57■□□□□ 0.88
EFCAB11-202ENST00000538485 TMEM191CA6NGB0 347 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 FGFR3P22607 806 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 CXCR5P32302 372 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 PLA2G4AP47712 749 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 FAM35AQ86V20 835 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 CPNE8Q86YQ8 564 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 MYLPFQ96A32 169 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 MCRS1Q96EZ8 462 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 KRT82Q9NSB4 513 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 TMEM30AQ9NV96 361 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 CXXC1Q9P0U4 656 aaPredicted RBP20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 AMFRQ9UKV5 643 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 XPO1O14980 1071 aaKnown RBP20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 ZNF185O15231 689 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 PRLRP16471 622 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 COMTP21964 271 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 RPL34P49207 117 aaKnown RBP20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 CACNA2D1P54289 1103 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 TSPY1Q01534 308 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 MRPL58Q14197 206 aaKnown RBP20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 BTG3Q14201 252 aaPredicted RBP20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 RPS6KA1Q15418 735 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 TMEM240Q5SV17 173 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 TAS1R1Q7RTX1 841 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 PIGZQ86VD9 579 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 SCUBE3Q8IX30 993 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 HES6Q96HZ4 224 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 PIWIL1Q96J94 861 aaKnown RBP20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 OSBPL9Q96SU4 736 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 SELENOOQ9BVL4 669 aa20.56■□□□□ 0.88
EFCAB11-202ENST00000538485 SIGLEC16A6NMB1 481 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 EFEMP2O95967 443 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 OR4Q2P0C623 313 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 FAM200BP0CF97 657 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 KRT3P12035 628 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 RFC1P35251 1148 aaPredicted RBP20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 MAP3K7CLP57077 242 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 SLC8A3P57103 927 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 ELAVL2Q12926 359 aaKnown RBP20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 DCUN1D2Q6PH85 259 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 KCNT2Q6UVM3 1135 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 FAM183BPQ6ZVS7 135 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 CMTR2Q8IYT2 770 aaKnown RBP20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 COG1Q8WTW3 980 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 KCNK16Q96T55 309 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 RHOBTB2Q9BYZ6 727 aa20.55■□□□□ 0.88
EFCAB11-202ENST00000538485 PAPSS1O43252 624 aaPredicted RBP20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 OGDHQ02218 1023 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 RTP2Q5QGT7 225 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 SPOUT1Q5T280 376 aaKnown RBP20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 OR6B2Q6IFH4 312 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 JOSD2Q8TAC2 188 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 IGSF21Q96ID5 467 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 HSFY1Q96LI6 401 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 YME1L1Q96TA2 773 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 SMOQ99835 787 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 MIS12Q9H081 205 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 METTL5Q9NRN9 209 aaKnown RBP20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 ZMYND8Q9ULU4 1186 aaPredicted RBP20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 MRPL42Q9Y6G3 142 aaKnown RBP20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 NLRC5Q86WI3 1866 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 AP1G2O75843 785 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 GJB5O95377 273 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 TCP1P17987 556 aaKnown RBP20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 TAP1Q03518 808 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 ZNF252P-AS1Q0IIN9 211 aa20.54■□□□□ 0.88
EFCAB11-202ENST00000538485 TUBB2AQ13885 445 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms