RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 KHSRPQ92945 711 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHFR-216ENST00000538235 TSPY26PQ9H489 355 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 WDR6Q9NNW5 1121 aaKnown RBP13.92□□□□□ -0.18
CHFR-216ENST00000538235 ABCB6Q9NP58 842 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 UBE2TQ9NPD8 197 aaPredicted RBP13.92□□□□□ -0.18
CHFR-216ENST00000538235 KRT82Q9NSB4 513 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 APEX2Q9UBZ4 518 aa13.92□□□□□ -0.18
CHFR-216ENST00000538235 NCOR1O75376 2440 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 A0A1B0GTH6 734 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 C2CD4DB7Z1M9 353 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 RHOP08100 348 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 SRGAP2BP0DMP2 458 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 P4HA1P13674 534 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 BRD2P25440 801 aaKnown RBP13.91□□□□□ -0.18
CHFR-216ENST00000538235 MAGEA11P43364 429 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 PLD1Q13393 1074 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 SYCP1Q15431 976 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 NFE2Q16621 373 aaPredicted RBP13.91□□□□□ -0.18
CHFR-216ENST00000538235 ARHGAP44Q17R89 818 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 UVSSAQ2YD98 709 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 KLHDC7AQ5VTJ3 777 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 TMEM270Q6UE05 265 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 CLEC20AQ6ZU45 233 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 SPATA2LQ8IUW3 424 aaPredicted RBP13.91□□□□□ -0.18
CHFR-216ENST00000538235 SCN4BQ8IWT1 228 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 SHKBP1Q8TBC3 707 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 TMEM176AQ96HP8 235 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 FUBP3Q96I24 572 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHFR-216ENST00000538235 FAXDC2Q96IV6 333 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 CORO1BQ9BR76 489 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 NT5C1AQ9BXI3 368 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
CHFR-216ENST00000538235 HSFX1Q9UBD0 423 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 DNAJC12Q9UKB3 198 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 TICRRQ7Z2Z1 1910 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 BDP1A6H8Y1 2624 aa13.91□□□□□ -0.18
CHFR-216ENST00000538235 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 SLC38A8A6NNN8 435 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 O00370 1275 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 TNFRSF10BO14763 440 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 LRG1P02750 347 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 TBXAS1P24557 533 aaPredicted RBP13.9□□□□□ -0.18
CHFR-216ENST00000538235 ELF1P32519 619 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 PBX1P40424 430 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 PKDCCQ504Y2 493 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 E4F1Q66K89 784 aaPredicted RBP13.9□□□□□ -0.18
CHFR-216ENST00000538235 GET4Q7L5D6 327 aaPredicted RBP13.9□□□□□ -0.18
CHFR-216ENST00000538235 DNAJB7Q7Z6W7 309 aaPredicted RBP13.9□□□□□ -0.18
CHFR-216ENST00000538235 NPAS3Q8IXF0 933 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 CCDC150Q8NCX0 1101 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 C2orf15Q8WU43 125 aaKnown RBP13.9□□□□□ -0.18
CHFR-216ENST00000538235 PSMG2Q969U7 264 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 ERGIC2Q96RQ1 377 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 HNRNPABQ99729 332 aaKnown RBP13.9□□□□□ -0.18
CHFR-216ENST00000538235 NAT10Q9H0A0 1025 aaKnown RBP13.9□□□□□ -0.18
CHFR-216ENST00000538235 RBSNQ9H1K0 784 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 SMOC2Q9H3U7 446 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 PCDHB4Q9Y5E5 795 aa13.9□□□□□ -0.18
CHFR-216ENST00000538235 C19orf67A6NJJ6 358 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 SMTNL1A8MU46 457 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 LOC730098B7Z3J9 87 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 FOXN3O00409 490 aaPredicted RBP13.89□□□□□ -0.19
CHFR-216ENST00000538235 PES1O00541 588 aaKnown RBP13.89□□□□□ -0.19
CHFR-216ENST00000538235 UCHL3P15374 230 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 MTHFRP42898 656 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 JAM2P57087 298 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 CYP4F8P98187 520 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 FANCCQ00597 558 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 GOLGA7BQ2TAP0 167 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 PABPC1LQ4VXU2 614 aaKnown RBP13.89□□□□□ -0.19
CHFR-216ENST00000538235 ARHGAP17Q68EM7 881 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 C4orf50Q6ZRC1 276 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 SCAMP5Q8TAC9 235 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 RIN3Q8TB24 985 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 ADAMTS19Q8TE59 1207 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 JAKMIP2Q96AA8 810 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 RSPRY1Q96DX4 576 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 CYFIP2Q96F07 1278 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 ZSWIM3Q96MP5 696 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 CSNK1G1Q9HCP0 422 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 FAM207AQ9NSI2 230 aaPredicted RBP13.89□□□□□ -0.19
CHFR-216ENST00000538235 CYTH4Q9UIA0 394 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 MAFFQ9ULX9 164 aa13.89□□□□□ -0.19
CHFR-216ENST00000538235 A0A1W2PRU2 124 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 FAM170AA1A519 330 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 AP1G2O75843 785 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 F11P03951 625 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 MYL4P12829 197 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 FCARP24071 287 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 CLCN1P35523 988 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 MAP3K7CLP57077 242 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 SMARCB1Q12824 385 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 DRAP1Q14919 205 aaPredicted RBP13.88□□□□□ -0.19
CHFR-216ENST00000538235 TEAD2Q15562 447 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 TJAP1Q5JTD0 557 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 ATAT1Q5SQI0 421 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 CES5AQ6NT32 575 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 BHLHA9Q7RTU4 235 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
CHFR-216ENST00000538235 TNIP3Q96KP6 325 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms