RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 YTHDF3Q7Z739 585 aaKnown RBP12□□□□□ -0.49
SLC28A1-204ENST00000538177 C10orf67Q8IYJ2 551 aa12□□□□□ -0.49
SLC28A1-204ENST00000538177 UBA3Q8TBC4 463 aa12□□□□□ -0.49
SLC28A1-204ENST00000538177 CHMP6Q96FZ7 201 aa12□□□□□ -0.49
SLC28A1-204ENST00000538177 ZNF317Q96PQ6 595 aaPredicted RBP12□□□□□ -0.49
SLC28A1-204ENST00000538177 RBM15Q96T37 977 aaKnown RBP eCLIP12□□□□□ -0.49
SLC28A1-204ENST00000538177 PTPN18Q99952 460 aa12□□□□□ -0.49
SLC28A1-204ENST00000538177 GCOM2Q9BZD3 368 aaPredicted RBP12□□□□□ -0.49
SLC28A1-204ENST00000538177 ASNSD1Q9NWL6 643 aa12□□□□□ -0.49
SLC28A1-204ENST00000538177 LGALS13Q9UHV8 139 aa12□□□□□ -0.49
SLC28A1-204ENST00000538177 CITO14578 2027 aa12□□□□□ -0.49
SLC28A1-204ENST00000538177 A0A087WUV0 522 aaPredicted RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 CST8O60676 142 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 RNF8O76064 485 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 PFKMP08237 780 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 ETS1P14921 441 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 GPS1Q13098 491 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 IRF5Q13568 498 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 STAT4Q14765 748 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 PCBP1Q15365 356 aaKnown RBP eCLIP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 QPCTQ16769 361 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 FAM102AQ5T9C2 384 aaPredicted RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 RNASEH2BQ5TBB1 312 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 SLC27A1Q6PCB7 646 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 ACTL9Q8TC94 416 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 ARHGEF2Q92974 986 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 HAUS1Q96CS2 278 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 SNX27Q96L92 541 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 CNPY3Q9BT09 278 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 TMEM121Q9BTD3 319 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 INTS9Q9NV88 658 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 DDX20Q9UHI6 824 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 MBLAC1A4D2B0 266 aaPredicted RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 C2CD4BA6NLJ0 364 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 ENDOD1O94919 500 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 OTUD4Q01804 1114 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 PLCB3Q01970 1234 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 PKDCCQ504Y2 493 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 KCTD6Q8NC69 237 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 C9orf72Q96LT7 481 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 ZMAT2Q96NC0 199 aaKnown RBP11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 CCDC77Q9BR77 488 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 CXCL16Q9H2A7 254 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 SLC5A4Q9NY91 659 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 SNTG2Q9NY99 539 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 PCSK1NQ9UHG2 260 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 TSPAN16Q9UKR8 245 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 USP18Q9UMW8 372 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 SHOC2Q9UQ13 582 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 NRCAMQ92823 1304 aa11.99□□□□□ -0.49
SLC28A1-204ENST00000538177 SMIM35A0A1B0GVV1 85 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 SGK1O00141 431 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 DYNC1LI2O43237 492 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 F2P00734 622 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 CD48P09326 243 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 SMIM10L2AP0DMW4 78 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 SMIM10L2BP0DMW5 78 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 PECAM1P16284 738 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 GPD1P21695 349 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 CCDC38Q502W7 563 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 ALKAL1Q6UXT8 129 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 CATSPER4Q7RTX7 472 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 LRRC52Q8N7C0 313 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 KAT2BQ92831 832 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 SEC16BQ96JE7 1060 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 CFAP57Q96MR6 1250 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 TTC25Q96NG3 672 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 FAM49AQ9H0Q0 323 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 RASSF4Q9H2L5 321 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 CDHR5Q9HBB8 845 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 EURLQ9NYK6 297 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 GNEQ9Y223 722 aaKnown RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 SRCAPQ6ZRS2 3230 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 E5RJQ4 531 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 ALOX15BO15296 676 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 CDH16O75309 829 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 KIAA0754O94854 1291 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 SETSIPP0DME0 302 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 DARSP14868 501 aaKnown RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 IRX5P78411 483 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 OR6B2Q6IFH4 312 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 TRNP1Q6NT89 227 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 NOTUMQ6P988 496 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 FAM183BPQ6ZVS7 135 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 CYP4V2Q6ZWL3 525 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 DPH6Q7L8W6 267 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 CPLX4Q7Z7G2 160 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 PCGF5Q86SE9 256 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 C2orf69Q8N8R5 385 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 C12orf29Q8N999 325 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 BEST2Q8NFU1 509 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 RXFP2Q8WXD0 754 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 MRPL45Q9BRJ2 306 aaKnown RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 EIF2AQ9BY44 585 aaKnown RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 SAYSD1Q9NPB0 183 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 SAE1Q9UBE0 346 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 NAALADL1Q9UQQ1 740 aa11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 FARP1Q9Y4F1 1045 aaPredicted RBP11.98□□□□□ -0.49
SLC28A1-204ENST00000538177 APOC4-APOC2K7ER74 178 aa11.97□□□□□ -0.49
SLC28A1-204ENST00000538177 PPEF2O14830 753 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms