RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ZC3H12AQ5D1E8 599 aaKnown RBP9.14□□□□□ -0.95
UBE3B-208ENST00000538070 C3orf62Q6ZUJ4 267 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 SLC4A11Q8NBS3 891 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 OR6J1Q8NGC5 347 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 USP18Q9UMW8 372 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 MAD1L1Q9Y6D9 718 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 IKBKGQ9Y6K9 419 aa9.14□□□□□ -0.95
UBE3B-208ENST00000538070 MCF2LO15068 1137 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 TP73O15350 636 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 YY1P25490 414 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 GJA5P36382 358 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 KLF1Q13351 362 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 FGD4Q96M96 766 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 TRABDQ9H4I3 376 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 CDHR5Q9HBB8 845 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 SLCO1B3Q9NPD5 702 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PRMT7Q9NVM4 692 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 SEPT10Q9P0V9 454 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PPP2R3BQ9Y5P8 575 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PDE4DIPQ5VU43 2346 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 ATP8B3O60423 1300 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 A8MXQ7 604 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PIGRP01833 764 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 ATP5DP30049 168 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 RDXP35241 583 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 VCPP55072 806 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 CLDN10P78369 228 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 ZNF200P98182 395 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 SNAPC2Q13487 334 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 SURF1Q15526 300 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 TSHZ1Q6ZSZ6 1077 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 CENPUQ71F23 418 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 FASTKD5Q7L8L6 764 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 C3orf20Q8ND61 904 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 ATXN2LQ8WWM7 1075 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 IFT122Q9HBG6 1241 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 CPA4Q9UI42 421 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 XPO7Q9UIA9 1087 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 DCTN4Q9UJW0 460 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 TRIM33Q9UPN9 1127 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PHIPQ8WWQ0 1821 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 SPDYE5A6NIY4 337 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 DNALI1O14645 258 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 KCNN4O15554 427 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 CDH16O75309 829 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 C22orf31O95567 290 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 P4HA1P13674 534 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 EDNRBP24530 442 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 CDKN2BP42772 138 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 NUMBP49757 651 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 LMNB2Q03252 620 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 OVGP1Q12889 678 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 IFRD2Q12894 506 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 CASC4Q6P4E1 433 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 C12orf50Q8NA57 414 aaPredicted RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 FAF2Q96CS3 445 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 VCPIP1Q96JH7 1222 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 MRPL45Q9BRJ2 306 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 EIF2AQ9BY44 585 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PITPNM3Q9BZ71 974 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PDZD7Q9H5P4 517 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 DHX35Q9H5Z1 703 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 SPON1Q9HCB6 807 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 RAB6BQ9NRW1 208 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 HESX1Q9UBX0 185 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 TUBGCP4Q9UGJ1 667 aa9.13□□□□□ -0.95
UBE3B-208ENST00000538070 PIN4Q9Y237 131 aaKnown RBP9.13□□□□□ -0.95
UBE3B-208ENST00000538070 E2F8A0AVK6 867 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ASB14A6NK59 587 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 CXCL11O14625 94 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ITGBL1O95965 494 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 CCDC130P13994 396 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 KDELR1P24390 212 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ACAT1P24752 427 aaKnown RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 SCTRP47872 440 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 AP3M2P53677 418 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 BEX3Q00994 111 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 GRIK4Q16099 956 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 PPP1R26Q5T8A7 1209 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ZNF449Q6P9G9 518 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 VSTM1Q6UX27 236 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 PLCD3Q8N3E9 789 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 ARFGAP1Q8N6T3 406 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 BBOF1Q8ND07 529 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 FBXO36Q8NEA4 188 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 CLEC4CQ8WTT0 213 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 P3H4Q92791 437 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 TRIM56Q9BRZ2 755 aaKnown RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 FZD8Q9H461 694 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 SLC40A1Q9NP59 571 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 PNMA3Q9UL41 463 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 STRIP2Q9ULQ0 834 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 TNS1Q9HBL0 1735 aaKnown RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 CCT8L1PA6NM43 557 aa9.12□□□□□ -0.95
UBE3B-208ENST00000538070 BHMG1C9JSJ3 638 aaPredicted RBP9.12□□□□□ -0.95
UBE3B-208ENST00000538070 APRTP07741 180 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms