RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 CNPP09543 421 aaKnown RBP12.19□□□□□ -0.46
CDCA3-206ENST00000536241 CDH5P33151 784 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-206ENST00000536241 IRS1P35568 1242 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 CACNA2D1P54289 1103 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 MAP3K7CLP57077 242 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 NOMO3P69849 1222 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 KRT83P78385 493 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 ROR1Q01973 937 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 NFE2Q16621 373 aaPredicted RBP12.19□□□□□ -0.46
CDCA3-206ENST00000536241 C2CD6Q53TS8 623 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 PMF1Q6P1K2 205 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 C4orf50Q6ZRC1 276 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 FAM35AQ86V20 835 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 ZNF461Q8TAF7 563 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 TIFAQ96CG3 184 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 SMOQ99835 787 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 PACSIN1Q9BY11 444 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 ISCUQ9H1K1 167 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 RXFP1Q9HBX9 757 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 ENTPD7Q9NQZ7 604 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDCA3-206ENST00000536241 TMEM30AQ9NV96 361 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 FNIP2Q9P278 1114 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 NENFQ9UMX5 172 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 TFR2Q9UP52 801 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 SLC27A5Q9Y2P5 690 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 CEP83Q9Y592 693 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 PCDHB5Q9Y5E4 795 aa12.19□□□□□ -0.46
CDCA3-206ENST00000536241 MYH10P35580 1976 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 A0A0U1RQJ8 604 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.18□□□□□ -0.46
CDCA3-206ENST00000536241 MTMR11A4FU01 709 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 C2orf71A6NGG8 1288 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 EPOPA6NHQ4 379 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 HIDE1A8MVS5 230 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 ABLIM3O94929 683 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 IPO7O95373 1038 aaKnown RBP12.18□□□□□ -0.46
CDCA3-206ENST00000536241 VNN2O95498 520 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 LSM8O95777 96 aaKnown RBP12.18□□□□□ -0.46
CDCA3-206ENST00000536241 FAM200BP0CF97 657 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 GRIK1P39086 918 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 RGS7P49802 495 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 BCAT1P54687 386 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 GALCP54803 685 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 ADCY1Q08828 1119 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 BST2Q10589 180 aaKnown RBP12.18□□□□□ -0.46
CDCA3-206ENST00000536241 DUSP4Q13115 394 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 RAB33AQ14088 237 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 PLPP4Q5VZY2 271 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 CLEC20AQ6ZU45 233 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 PHLDB2Q86SQ0 1253 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 ERICH1Q86X53 443 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 ZMIZ2Q8NF64 920 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 ATRIPQ8WXE1 791 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 SMARCD1Q96GM5 515 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 KLHL5Q96PQ7 755 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 NGRNQ9NPE2 291 aaKnown RBP12.18□□□□□ -0.46
CDCA3-206ENST00000536241 ST7Q9NRC1 585 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 KRT82Q9NSB4 513 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.18□□□□□ -0.46
CDCA3-206ENST00000536241 IRAK3Q9Y616 596 aa12.18□□□□□ -0.46
CDCA3-206ENST00000536241 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 PIK3R2O00459 728 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 FSCN2O14926 492 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 GABBR2O75899 941 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 ABL1P00519 1130 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 H2AFZP0C0S5 128 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 SPATA31D3P0C874 917 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 NPR3P17342 541 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 ABCB4P21439 1286 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 KLRC2P26717 231 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 NSFP46459 744 aaKnown RBP12.17□□□□□ -0.46
CDCA3-206ENST00000536241 SLC8A3P57103 927 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 CENPCQ03188 943 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 SMARCB1Q12824 385 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 SMC1AQ14683 1233 aaKnown RBP12.17□□□□□ -0.46
CDCA3-206ENST00000536241 CFAP221Q4G0U5 840 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 C10orf76Q5T2E6 689 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 SPATA31D4Q6ZUB0 917 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 H2AFVQ71UI9 128 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 PIGZQ86VD9 579 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 SCN4BQ8IWT1 228 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 MCOLN2Q8IZK6 566 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 TTC9BQ8N6N2 239 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 FUBP3Q96I24 572 aaKnown RBP eCLIP12.17□□□□□ -0.46
CDCA3-206ENST00000536241 PPP1R13BQ96KQ4 1090 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 CPXM1Q96SM3 734 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 CRISPLD1Q9H336 500 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 CSNK1G1Q9HCP0 422 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 TRMT1Q9NXH9 659 aaKnown RBP12.17□□□□□ -0.46
CDCA3-206ENST00000536241 ADAM22Q9P0K1 906 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 TJP2Q9UDY2 1190 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 PPP2R2CQ9Y2T4 447 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 TNRC18O15417 2968 aaPredicted RBP12.17□□□□□ -0.46
CDCA3-206ENST00000536241 MYO9BQ13459 2157 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 MYO7AQ13402 2215 aa12.17□□□□□ -0.46
CDCA3-206ENST00000536241 F8VP50 259 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 XPO1O14980 1071 aaKnown RBP12.16□□□□□ -0.46
CDCA3-206ENST00000536241 LPXNO60711 386 aa12.16□□□□□ -0.46
CDCA3-206ENST00000536241 SOAT2O75908 522 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms