RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, human

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YBX3-205	ENST00000536107	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	PHOSPHO1	Q8TCT1	267 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	RASGRP4	Q8TDF6	673 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	SCFD2	Q8WU76	684 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	ATP6V0A1	Q93050	837 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	ZNF689	Q96CS4	500 aa	Predicted RBP	4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	ZNF764	Q96H86	408 aa	Predicted RBP	4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	KLHL5	Q96PQ7	755 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	OR14A2	Q96R54	314 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	KATNAL1	Q9BW62	490 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	SLC38A10	Q9HBR0	1119 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	MCM9	Q9NXL9	1143 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	REXO2	Q9Y3B8	237 aa	Known RBP	4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	MSRB2	Q9Y3D2	182 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	NEUROG3	Q9Y4Z2	214 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	PTPRS	Q13332	1948 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	FRMPD2	Q68DX3	1309 aa	Predicted RBP	4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	PIEZO2	Q9H5I5	2752 aa		4.63	□□□□□ -1.67
YBX3-205	ENST00000536107	DMXL2	Q8TDJ6	3036 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	ENO4	A6NNW6	628 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	PYCARD-AS1	I3L0S3	204 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	NCAM2	O15394	837 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	C1QL1	O75973	258 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	CIAO1	O76071	339 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	ZNF286B	P0CG31	522 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	STAG3L1	P0CL83	205 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	GHR	P10912	638 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	RDX	P35241	583 aa	Known RBP	4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	MAGEA9	P43362	315 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	RFX5	P48382	616 aa	Predicted RBP	4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	SLC7A5	Q01650	507 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	TAGLN	Q01995	201 aa	Known RBP	4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	KCNC3	Q14003	757 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	BMS1	Q14692	1282 aa	Known RBP	4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	DGKD	Q16760	1214 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	PHF19	Q5T6S3	580 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	DAB2IP	Q5VWQ8	1189 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	E4F1	Q66K89	784 aa	Predicted RBP	4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	CERS3	Q8IU89	383 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	FRS2	Q8WU20	508 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	KAT2B	Q92831	832 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	SPON2	Q9BUD6	331 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	PCGF6	Q9BYE7	350 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	ARRDC1-AS1	Q9H2J1	176 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	KANSL2	Q9H9L4	492 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	MSL2	Q9HCI7	577 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	KCND1	Q9NSA2	647 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	CYP39A1	Q9NYL5	469 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	MYOT	Q9UBF9	498 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	SWAP70	Q9UH65	585 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	KLK13	Q9UKR3	277 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	AKT3	Q9Y243	479 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	ANKRD17	O75179	2603 aa	Known RBP	4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	TANC1	Q9C0D5	1861 aa		4.62	□□□□□ -1.67
YBX3-205	ENST00000536107	PTPDC1	A2A3K4	754 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	C17orf102	A2RUQ5	167 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	C4orf47	A7E2U8	309 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107		F5H6K3	240 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107		H7BY64	318 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	INO80B-WBP1	J3KQ70	363 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	CAPN9	O14815	690 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	CDC14B	O60729	498 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	CLASP2	O75122	1294 aa	Known RBP	4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	KCNH1	O95259	989 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	GH1	P01241	217 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	UQCRFS1P1	P0C7P4	283 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	CD72	P21854	359 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	RPS19	P39019	145 aa	Known RBP	4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	GATM	P50440	423 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	ALDH5A1	P51649	535 aa	Predicted RBP	4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	STARD6	P59095	220 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	KRT17	Q04695	432 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	KLRC3	Q07444	240 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	ADCY1	Q08828	1119 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	SCAP	Q12770	1279 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	SMC1A	Q14683	1233 aa	Known RBP	4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	RNF151	Q2KHN1	245 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	TKFC	Q3LXA3	575 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	ZBTB41	Q5SVQ8	909 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	FBXW10	Q5XX13	1052 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	POMZP3	Q6PJE2	187 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	SERINC5	Q86VE9	423 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	PRIMA1	Q86XR5	153 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	ZNF843	Q8N446	348 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	NELL1	Q92832	810 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	DYNLL2	Q96FJ2	89 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	CCDC17	Q96LX7	622 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	DPYSL5	Q9BPU6	564 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	INO80B	Q9C086	356 aa	Predicted RBP	4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	SMOC1	Q9H4F8	434 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	PARPBP	Q9NWS1	579 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	PTGFRN	Q9P2B2	879 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	FEM1B	Q9UK73	627 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	EMC9	Q9Y3B6	208 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	MTF2	Q9Y483	593 aa	Predicted RBP	4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	LAMA5	O15230	3695 aa		4.61	□□□□□ -1.67
YBX3-205	ENST00000536107	WDFY3	Q8IZQ1	3526 aa		4.6	□□□□□ -1.67
YBX3-205	ENST00000536107	MYO9A	B2RTY4	2548 aa		4.6	□□□□□ -1.67
YBX3-205	ENST00000536107	SHISA7	A6NL88	538 aa		4.6	□□□□□ -1.67

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