RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 CYFIP2Q96F07 1278 aa12.81□□□□□ -0.36
CHD4-203ENST00000535717 ZNF512Q96ME7 567 aaPredicted RBP12.81□□□□□ -0.36
CHD4-203ENST00000535717 RIPOR3Q96MK2 946 aa12.81□□□□□ -0.36
CHD4-203ENST00000535717 HNRNPABQ99729 332 aaKnown RBP12.81□□□□□ -0.36
CHD4-203ENST00000535717 NAA15Q9BXJ9 866 aaKnown RBP12.81□□□□□ -0.36
CHD4-203ENST00000535717 GANQ9H2C0 597 aa12.81□□□□□ -0.36
CHD4-203ENST00000535717 POMKQ9H5K3 350 aa12.81□□□□□ -0.36
CHD4-203ENST00000535717 FAM207AQ9NSI2 230 aaPredicted RBP12.81□□□□□ -0.36
CHD4-203ENST00000535717 DNMT3BQ9UBC3 853 aaKnown RBP12.81□□□□□ -0.36
CHD4-203ENST00000535717 FHOD1Q9Y613 1164 aa12.81□□□□□ -0.36
CHD4-203ENST00000535717 ATP8B3O60423 1300 aa12.81□□□□□ -0.36
CHD4-203ENST00000535717 F8VP50 259 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 EPHB6O15197 1021 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 PAEPP09466 180 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 BMP1P13497 986 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 IL9P15248 144 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 PTPN2P17706 415 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 ADORA2BP29275 332 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 GRIK1P39086 918 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 PPP1R26Q5T8A7 1209 aaPredicted RBP12.8□□□□□ -0.36
CHD4-203ENST00000535717 ARHGAP17Q68EM7 881 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 DNAJB7Q7Z6W7 309 aaPredicted RBP12.8□□□□□ -0.36
CHD4-203ENST00000535717 GAS2L3Q86XJ1 694 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 ELMOD1Q8N336 334 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 STKLD1Q8NE28 680 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 TFAP2BQ92481 460 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 PSMG2Q969U7 264 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 SMARCD1Q96GM5 515 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 PCMTD1Q96MG8 357 aaPredicted RBP12.8□□□□□ -0.36
CHD4-203ENST00000535717 NECTIN4Q96NY8 510 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 ZSWIM1Q9BR11 485 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 CORO1BQ9BR76 489 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 LRRC3Q9BY71 257 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 GPR88Q9GZN0 384 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 WDR6Q9NNW5 1121 aaKnown RBP12.8□□□□□ -0.36
CHD4-203ENST00000535717 KRT82Q9NSB4 513 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 KIAA1257Q9ULG3 409 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 FAM50BQ9Y247 325 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 ASB3Q9Y575 518 aa12.8□□□□□ -0.36
CHD4-203ENST00000535717 NOTCH4Q99466 2003 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 FOXN3O00409 490 aaPredicted RBP12.79□□□□□ -0.36
CHD4-203ENST00000535717 TRIM66O15016 1216 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 AP1G2O75843 785 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 BEST1O76090 585 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 RHOP08100 348 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 FAM200BP0CF97 657 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 PNMA6AP0CW24 399 aaPredicted RBP12.79□□□□□ -0.36
CHD4-203ENST00000535717 VDRP11473 427 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 CD19P15391 556 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 RFX1P22670 979 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 USP8P40818 1118 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 UBASH3AP57075 661 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 POLR2FP61218 127 aaKnown RBP12.79□□□□□ -0.36
CHD4-203ENST00000535717 MTMR3Q13615 1198 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 RAPGEF1Q13905 1077 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 DRAP1Q14919 205 aaPredicted RBP12.79□□□□□ -0.36
CHD4-203ENST00000535717 VEPH1Q14D04 833 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 PABPC1LQ4VXU2 614 aaKnown RBP12.79□□□□□ -0.36
CHD4-203ENST00000535717 SGO2Q562F6 1265 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 ITIH5Q86UX2 942 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 TMC8Q8IU68 726 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 ZMIZ2Q8NF64 920 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 NEK11Q8NG66 645 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 SPATA17Q96L03 361 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 C8orf48Q96LL4 319 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 KCNK16Q96T55 309 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 SMOQ99835 787 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 STK33Q9BYT3 514 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 RBSNQ9H1K0 784 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 ZNF334Q9HCZ1 680 aaPredicted RBP12.79□□□□□ -0.36
CHD4-203ENST00000535717 DMAP1Q9NPF5 467 aaPredicted RBP12.79□□□□□ -0.36
CHD4-203ENST00000535717 ACP6Q9NPH0 428 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 IFNKQ9P0W0 207 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 CLUHO75153 1309 aa12.79□□□□□ -0.36
CHD4-203ENST00000535717 A0A1W2PQC6 194 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 SLC38A8A6NNN8 435 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 O00370 1275 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 NRG2O14511 850 aaPredicted RBP12.78□□□□□ -0.36
CHD4-203ENST00000535717 CYP26A1O43174 497 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 HMGA1P17096 107 aaKnown RBP12.78□□□□□ -0.36
CHD4-203ENST00000535717 FSHRP23945 695 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 BRD2P25440 801 aaKnown RBP12.78□□□□□ -0.36
CHD4-203ENST00000535717 ANXA13P27216 316 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 CCR2P41597 374 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 EPHA5P54756 1037 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 MAP3K7CLP57077 242 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 GSE1Q14687 1217 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 SLC5A9Q2M3M2 681 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 GOLGA7BQ2TAP0 167 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 SMYD5Q6GMV2 418 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 CLEC20AQ6ZU45 233 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 FAM71AQ8IYT1 594 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 ITFG1Q8TB96 612 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 TCEAL4Q96EI5 215 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 CEP295NLQ96MC4 621 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 PHF7Q9BWX1 381 aaPredicted RBP12.78□□□□□ -0.36
CHD4-203ENST00000535717 DUSP16Q9BY84 665 aa12.78□□□□□ -0.36
CHD4-203ENST00000535717 NLRC4Q9NPP4 1024 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms