RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 CENPJQ9HC77 1338 aaPredicted RBP3.95□□□□□ -1.78
SNHG1-202ENST00000535689 N4BP2Q86UW6 1770 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 C5P01031 1676 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 DICER1Q9UPY3 1922 aaKnown RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 TCRBV7S2A1N4TA0A589 114 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 MYADML2A6NDP7 307 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 NT5C1B-RDH14C9J2C7 533 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 FOXN1O15353 648 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 CA12O43570 354 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 TRIAP1O43715 76 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 AGFG2O95081 481 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 GPANK1O95872 356 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 ATXN1LP0C7T5 689 aaKnown RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 ZKSCAN1P17029 563 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 EN2P19622 333 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 FPR1P21462 350 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 LRPAP1P30533 357 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 RFC4P35249 363 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 MAGEA10P43363 369 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 LBX1P52954 281 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 ARFIP2P53365 341 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 USP14P54578 494 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 ACAP1Q15027 740 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 LLGL1Q15334 1064 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 INSCQ1MX18 579 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 DEFB115Q30KQ5 88 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 PRR16Q569H4 304 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 RABL3Q5HYI8 236 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 FAM160B1Q5W0V3 765 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 TSHZ3Q63HK5 1081 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 UBE3BQ7Z3V4 1068 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 GDF7Q7Z4P5 450 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 MYLK4Q86YV6 388 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 TMPRSS6Q8IU80 811 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 YAF2Q8IY57 180 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 FAM186BQ8IYM0 893 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 PPP1R35Q8TAP8 253 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 ANKS1AQ92625 1134 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 NMD3Q96D46 503 aaKnown RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 PGBD4Q96DM1 585 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 BOD1Q96IK1 185 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 PHACTR3Q96KR7 559 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 DMRTA2Q96SC8 542 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 ELAC2Q9BQ52 826 aaKnown RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 LSM14BQ9BX40 385 aaKnown RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 KLC2Q9H0B6 622 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 ZNF703Q9H7S9 590 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 NLRC4Q9NPP4 1024 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 STARD7Q9NQZ5 370 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 SHOC2Q9UQ13 582 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 CEP83Q9Y592 693 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 FPGT-TNNI3KV9GXZ4 949 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 KIAA1210Q9ULL0 1709 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 CICQ96RK0 1608 aaPredicted RBP3.94□□□□□ -1.78
SNHG1-202ENST00000535689 UBR3Q6ZT12 1888 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 LTN1O94822 1766 aa3.94□□□□□ -1.78
SNHG1-202ENST00000535689 PKD1L3Q7Z443 1732 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 KTN1Q86UP2 1357 aaKnown RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 CCDC195A0A1B0GUA6 201 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 MBD3L4A6NDZ8 208 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 MBD3L3A6NE82 208 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 POLRMTO00411 1230 aaKnown RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 THAP12O43422 761 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 PRICKLE3O43900 615 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 SCAF4O95104 1147 aaKnown RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 IL18RAPO95256 599 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 FOSP01100 380 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 MMP10P09238 476 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 DPEP1P16444 411 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 LAG3P18627 525 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 ITGALP20701 1170 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 BMPR1AP36894 532 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 VIPR2P41587 438 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 AMPHP49418 695 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 RPS7P62081 194 aaKnown RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 NHLH2Q02577 135 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 TAP1Q03518 808 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 SLC13A2Q13183 592 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 MORC3Q14149 939 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 HLXQ14774 488 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 IQCB1Q15051 598 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 FAM214AQ32MH5 1076 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 MGAT5BQ3V5L5 792 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 PREPLQ4J6C6 727 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 MZT2AQ6P582 158 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 USP37Q86T82 979 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 XYLT1Q86Y38 959 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 KRT73Q86Y46 540 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 ZNF808Q8N4W9 903 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 CCDC150Q8NCX0 1101 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 SLC17A8Q8NDX2 589 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 IL31RAQ8NI17 732 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 SLC35B2Q8TB61 432 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 BRI3BPQ8WY22 251 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 MSLNLQ96KJ4 702 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 HEPHQ9BQS7 1158 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 COLEC11Q9BWP8 271 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 SSBP3Q9BWW4 388 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-202ENST00000535689 C1QTNF3Q9BXJ4 246 aa3.93□□□□□ -1.78
SNHG1-202ENST00000535689 IMPG2Q9BZV3 1241 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms