RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 FAM83CQ9BQN1 747 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 ELOVL4Q9GZR5 314 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 NACA2Q9H009 215 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 IKZF4Q9H2S9 585 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 SEMA4GQ9NTN9 838 aa14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 TFIP11Q9UBB9 837 aaKnown RBP14.15□□□□□ -0.14
CLSTN3-205ENST00000535452 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 A8MXQ7 604 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 POLR2DO15514 142 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 ZBTB24O43167 697 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 AKAP3O75969 853 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 FAM163BP0C2L3 166 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 HMGA1P17096 107 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 BDNFP23560 247 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 ATICP31939 592 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 GPR15P49685 360 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 PSMC1P62191 440 aaKnown RBP14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 CSRP2Q16527 193 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 SOWAHAQ2M3V2 549 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 WDR72Q3MJ13 1102 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 TMEM196Q5HYL7 178 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 TRIM68Q6AZZ1 485 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 UNC13DQ70J99 1090 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 TRAPPC11Q7Z392 1133 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 CBWD2Q8IUF1 395 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 NELFCDQ8IXH7 590 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 PDZD8Q8NEN9 1154 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 LOXL4Q96JB6 756 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 TNIP3Q96KP6 325 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 SPATA17Q96L03 361 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 CGRRF1Q99675 332 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 MED10Q9BTT4 135 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 ECT2Q9H8V3 914 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 TMLHEQ9NVH6 421 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 KBTBD4Q9NVX7 518 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 NUP210Q8TEM1 1887 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 COL4A3Q01955 1670 aa14.14□□□□□ -0.15
CLSTN3-205ENST00000535452 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 NRG2O14511 850 aaPredicted RBP14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 GABRDO14764 452 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 RNF40O75150 1001 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 ALDH1A2O94788 518 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 RHOBTB1O94844 696 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 APBB3O95704 486 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 WARSP23381 471 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 ATXN1P54253 815 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 FOXD4L5Q5VV16 416 aaPredicted RBP14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 PRR23CQ6ZRP0 262 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 CCDC150Q8NCX0 1101 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 MYCBPAPQ8TBZ2 947 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 SH3RF2Q8TEC5 729 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 GAB3Q8WWW8 586 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 FOXD4L4Q8WXT5 416 aaPredicted RBP14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 C7orf25Q9BPX7 421 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 IMPG2Q9BZV3 1241 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 AGPAT3Q9NRZ7 376 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 EXOC1Q9NV70 894 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 NXF1Q9UBU9 619 aaKnown RBP14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 CCL26Q9Y258 94 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 NCANO14594 1321 aa14.13□□□□□ -0.15
CLSTN3-205ENST00000535452 FANCMQ8IYD8 2048 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 PVALEFA0A1B0GWK0 134 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 SHISA7A6NL88 538 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 AXIN1O15169 862 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 TACC1O75410 805 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 RTN3O95197 1032 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 TDGF1P13385 188 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 GBP1P32455 592 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 GJA4P35212 333 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 GOLGA8FQ08AF8 430 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 GOLGA8DPQ0D2H9 430 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 IFRD2Q12894 506 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 GAS6Q14393 721 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 PSMD6Q15008 389 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 FOXD4L6Q3SYB3 417 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 MDH1BQ5I0G3 518 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 BTBD8Q5XKL5 378 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 FAM171BQ6P995 826 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 FOXD4L3Q6VB84 417 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 FAM160A2Q8N612 972 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 ARL14EPQ8N8R7 260 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 TSTD1Q8NFU3 115 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 OR5B17Q8NGF7 314 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 ZNF507Q8TCN5 953 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 LRRC3BQ96PB8 259 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 HPS4Q9NQG7 708 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 SIX4Q9UIU6 781 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 ARHGAP26Q9UNA1 814 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 TSC2P49815 1807 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 EP300Q09472 2414 aaPredicted RBP14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 GVINP1Q7Z2Y8 2422 aa14.12□□□□□ -0.15
CLSTN3-205ENST00000535452 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 K7ESF4 209 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 CLIC2O15247 247 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 HRO43593 1189 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 ADH1CP00326 375 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 EGFP01133 1207 aa14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 ZSCAN22P10073 491 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 MBL2P11226 248 aaPredicted RBP14.11□□□□□ -0.15
CLSTN3-205ENST00000535452 ARSAP15289 507 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms