RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 NCOA4Q13772 614 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 ZACNQ401N2 412 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 GPRIN1Q7Z2K8 1008 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 ACOT1Q86TX2 421 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 SPATA2LQ8IUW3 424 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-215ENST00000533946 SLC9A9Q8IVB4 645 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 C1orf210Q8IVY1 113 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 CMTM8Q8IZV2 173 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 TMEM86AQ8N2M4 240 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 DCLK2Q8N568 766 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 ARL14EPQ8N8R7 260 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-215ENST00000533946 ZMIZ2Q8NF64 920 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 MYCBPAPQ8TBZ2 947 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 OXCT2Q9BYC2 517 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-215ENST00000533946 SCAND2PQ9GZW5 306 aaPredicted RBP10.29□□□□□ -0.76
SSBP3-215ENST00000533946 EBF3Q9H4W6 596 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 KIAA1586Q9HCI6 787 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 TRPC7Q9HCX4 862 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 GKN1Q9NS71 199 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 GCNT4Q9P109 453 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 HSFX1Q9UBD0 423 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 ASB3Q9Y575 518 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 PCDHA5Q9Y5H7 936 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 MYO16Q9Y6X6 1858 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 HELZP42694 1942 aaKnown RBP10.29□□□□□ -0.76
SSBP3-215ENST00000533946 SDK1Q7Z5N4 2213 aa10.29□□□□□ -0.76
SSBP3-215ENST00000533946 MYH10P35580 1976 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 ZNF263O14978 683 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 GFRA3O60609 400 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 PHACTR2O75167 634 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 CHRNB1P11230 501 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 TDGF1P13385 188 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 RFX1P22670 979 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 NR2F2P24468 414 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 GRIK1P39086 918 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 ASPAP45381 313 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 SATB1Q01826 763 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 PRKCQQ04759 706 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 MYO1EQ12965 1108 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 PSMD2Q13200 908 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 SRSF5Q13243 272 aaKnown RBP10.28□□□□□ -0.76
SSBP3-215ENST00000533946 PON2Q15165 354 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 SURF1Q15526 300 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 ANKRD40Q6AI12 368 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 FUKQ8N0W3 1084 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 WHAMMQ8TF30 809 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 TATDN2Q93075 761 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 CLDN23Q96B33 292 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 P2RY11Q96G91 374 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 ARID3AQ99856 593 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 FAM83CQ9BQN1 747 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 BCO2Q9BYV7 579 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 LMAN1LQ9HAT1 526 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 SPATA6Q9NWH7 488 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-215ENST00000533946 MAGEC2Q9UBF1 373 aaPredicted RBP10.28□□□□□ -0.76
SSBP3-215ENST00000533946 CDH9Q9ULB4 789 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 TRAF3IP3Q9Y228 551 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 WNT6Q9Y6F9 365 aa10.28□□□□□ -0.76
SSBP3-215ENST00000533946 A8MXQ7 604 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 SPECC1L-ADORA2AF8WAN1 911 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 TACC1O75410 805 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 ASS1P00966 412 aaKnown RBP10.27□□□□□ -0.77
SSBP3-215ENST00000533946 PAX3P23760 479 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 PCSK1P29120 753 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 VAMP7P51809 220 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 NDST1P52848 882 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 TNNC1P63316 161 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 CSTF1Q05048 431 aaKnown RBP10.27□□□□□ -0.77
SSBP3-215ENST00000533946 TRPC3Q13507 836 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 KCNB1Q14721 858 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 VEPH1Q14D04 833 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 TAF12Q16514 161 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 NFE2Q16621 373 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-215ENST00000533946 GAB4Q2WGN9 574 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 ZNF699Q32M78 642 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 ITIH5Q86UX2 942 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 MON1AQ86VX9 555 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 GUF1Q8N442 669 aaKnown RBP10.27□□□□□ -0.77
SSBP3-215ENST00000533946 LEMD2Q8NC56 503 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 B3GALNT2Q8NCR0 500 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 C2orf15Q8WU43 125 aaKnown RBP10.27□□□□□ -0.77
SSBP3-215ENST00000533946 FAM3CQ92520 227 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 MYRFLQ96LU7 910 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 SMOQ99835 787 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 ELOVL4Q9GZR5 314 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 SNX25Q9H3E2 840 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 FAM49BQ9NUQ9 324 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 SMPD4Q9NXE4 827 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 CHORDC1Q9UHD1 332 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-215ENST00000533946 USP25Q9UHP3 1055 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 MAN1B1Q9UKM7 699 aa10.27□□□□□ -0.77
SSBP3-215ENST00000533946 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.77
SSBP3-215ENST00000533946 PROB1E7EW31 1015 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 BIN1O00499 593 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 TNFRSF10BO14763 440 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 CHADO15335 359 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 STAU1O95793 577 aaKnown RBP10.26□□□□□ -0.77
SSBP3-215ENST00000533946 CSH1P0DML2 217 aa10.26□□□□□ -0.77
SSBP3-215ENST00000533946 CSH2P0DML3 217 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms