RNA–Protein interactions for RNA: ENST00000533155.5

NCAPD3-210, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 3

Gene NCAPD3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-210ENST00000533155 CMTM8Q8IZV2 173 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 CELF5Q8N6W0 485 aaKnown RBP18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 STKLD1Q8NE28 680 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 BPIFB1Q8TDL5 484 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 TAF4BQ92750 862 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 SMARCE1Q969G3 411 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 RSPRY1Q96DX4 576 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 PCED1BQ96HM7 432 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 SPATA17Q96L03 361 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 GTPBP4Q9BZE4 634 aaKnown RBP18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 THG1LQ9NWX6 298 aaKnown RBP18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 EHD2Q9NZN4 543 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 NME7Q9Y5B8 376 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 PCDHA5Q9Y5H7 936 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 PIAS3Q9Y6X2 628 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 NCANO14594 1321 aa18.39■□□□□ 0.53
NCAPD3-210ENST00000533155 F5P12259 2224 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 PRAMEF12O95522 483 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 NBL1P41271 181 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 CDH8P55286 799 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 ZCWPW2Q504Y3 356 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 C1orf220Q5T0J3 134 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 C1orf210Q8IVY1 113 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 ELOA2Q8IYF1 753 aaPredicted RBP18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 MAB21L3Q8N8X9 362 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 SPATA20Q8TB22 786 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 KIF9Q9HAQ2 790 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 MTF2Q9Y483 593 aaPredicted RBP18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 CACNA1IQ9P0X4 2223 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 COL4A3Q01955 1670 aa18.38■□□□□ 0.53
NCAPD3-210ENST00000533155 PROB1E7EW31 1015 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 ARNTLO00327 626 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 CETN3O15182 167 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 LRRN2O75325 713 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 TARSP26639 723 aaKnown RBP18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 PRCPP42785 496 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 RPS9P46781 194 aaKnown RBP18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 COBLL1Q53SF7 1204 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 MON1AQ86VX9 555 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 B3GALNT2Q8NCR0 500 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 FAM3CQ92520 227 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 CLDN23Q96B33 292 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 TNIP3Q96KP6 325 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 IMPG2Q9BZV3 1241 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 ELOVL4Q9GZR5 314 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 DPEP3Q9H4B8 488 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 SMYD3Q9H7B4 428 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 C8orf33Q9H7E9 229 aaPredicted RBP18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 COL4A2P08572 1712 aa18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 KIF26AQ9ULI4 1882 aaPredicted RBP18.37■□□□□ 0.53
NCAPD3-210ENST00000533155 ATP8B3O60423 1300 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 HLA-DRAP01903 254 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 PIK3CAP42336 1068 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 RAP1GAPP47736 663 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 GCLMP48507 274 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 KPNA1P52294 538 aaPredicted RBP18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 TXNDC8Q6A555 127 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 SCARA5Q6ZMJ2 495 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 DENND5BQ6ZUT9 1274 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 ERCC4Q92889 916 aaPredicted RBP18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 ELMO3Q96BJ8 720 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 C8orf48Q96LL4 319 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 LRRC3BQ96PB8 259 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 TSG101Q99816 390 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 TDP1Q9NUW8 608 aa18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 SPATA6Q9NWH7 488 aaPredicted RBP18.36■□□□□ 0.53
NCAPD3-210ENST00000533155 LAMTOR5O43504 91 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 KINO60870 393 aaKnown RBP18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 ASS1P00966 412 aaKnown RBP18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 TRIM49P0CI25 452 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 TRIM49CP0CI26 452 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 TRIM21P19474 475 aaKnown RBP18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 GTF2H1P32780 548 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 PDE6CP51160 858 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 MCCD1P59942 119 aaPredicted RBP18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 PPP3CAQ08209 521 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 ZNF268Q14587 947 aaPredicted RBP18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 IER2Q9BTL4 223 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 B3GNT5Q9BYG0 378 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 SMG9Q9H0W8 520 aaKnown RBP18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 SDCBP2Q9H190 292 aa18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 NDRG2Q9UN36 371 aaKnown RBP18.35■□□□□ 0.53
NCAPD3-210ENST00000533155 TRAV19A0A0A6YYK7 116 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 SHISA7A6NL88 538 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 F8VP50 259 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 GFRA3O60609 400 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 TADA3O75528 432 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 USP17L7P0C7H9 530 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 EPB41P11171 864 aaKnown RBP18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 PPP3CCP48454 512 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 NOP14P78316 857 aaKnown RBP18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 ANKRD40Q6AI12 368 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 SPOPLQ6IQ16 392 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 CC2D1AQ6P1N0 951 aaPredicted RBP18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 ZC3H14Q6PJT7 736 aaKnown RBP18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 FRMD5Q7Z6J6 570 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 RALGPS2Q86X27 583 aaPredicted RBP18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 CCDC150Q8NCX0 1101 aa18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 USP13Q92995 863 aaPredicted RBP18.34■□□□□ 0.53
NCAPD3-210ENST00000533155 MMRN2Q9H8L6 949 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms