RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TMEM63CQ9P1W3 806 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 NME7Q9Y5B8 376 aa17.75■□□□□ 0.43
PKP3-209ENST00000533069 CHADO15335 359 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 STX10O60499 249 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 HLA-DRAP01903 254 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 TRIM49P0CI25 452 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 TRIM49CP0CI26 452 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 EPB41P11171 864 aaKnown RBP17.74■□□□□ 0.43
PKP3-209ENST00000533069 AVPR1AP37288 418 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 GRIK1P39086 918 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 PPP1R2P41236 205 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 MLLT6P55198 1093 aaPredicted RBP17.74■□□□□ 0.43
PKP3-209ENST00000533069 LRRC63Q05C16 580 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 STIM1Q13586 685 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 ZNF852Q6ZMS4 543 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 TPRG1Q6ZUI0 275 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 MON1AQ86VX9 555 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 CMTM8Q8IZV2 173 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 CELF5Q8N6W0 485 aaKnown RBP17.74■□□□□ 0.43
PKP3-209ENST00000533069 RSPRY1Q96DX4 576 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 MSANTD3Q96H12 275 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 C8orf48Q96LL4 319 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 SLC46A2Q9BY10 475 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 FOXQ1Q9C009 403 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 DPEP3Q9H4B8 488 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 KIF9Q9HAQ2 790 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 TMEM8AQ9HCN3 771 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 HEBP1Q9NRV9 189 aa17.74■□□□□ 0.43
PKP3-209ENST00000533069 MRPS17Q9Y2R5 130 aaKnown RBP17.74■□□□□ 0.43
PKP3-209ENST00000533069 NCANO14594 1321 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 ATP8B3O60423 1300 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 MAN2B1O00754 1011 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 SLC16A3O15427 465 aaKnown RBP17.73■□□□□ 0.43
PKP3-209ENST00000533069 PRAMEF12O95522 483 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 GLULP15104 373 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 TRIM21P19474 475 aaKnown RBP17.73■□□□□ 0.43
PKP3-209ENST00000533069 MAGEA9P43362 315 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 GCLMP48507 274 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 FKBP3Q00688 224 aaKnown RBP17.73■□□□□ 0.43
PKP3-209ENST00000533069 PLCB2Q00722 1185 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 PPP3CAQ08209 521 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 UBXN2BQ14CS0 331 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 ARHGAP29Q52LW3 1261 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 C1orf228Q6PIY5 440 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 SCARA5Q6ZMJ2 495 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 DENND5BQ6ZUT9 1274 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 ZC3H3Q8IXZ2 948 aaKnown RBP17.73■□□□□ 0.43
PKP3-209ENST00000533069 ADSSL1Q8N142 457 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 CCDC150Q8NCX0 1101 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 STKLD1Q8NE28 680 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 LTB4R2Q9NPC1 389 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 DLGAP2Q9P1A6 1054 aa17.73■□□□□ 0.43
PKP3-209ENST00000533069 H0Y858 1186 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 ARNTLO00327 626 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 PSMA7O14818 248 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 HOXD11P31277 338 aaPredicted RBP17.72■□□□□ 0.43
PKP3-209ENST00000533069 ASPAP45381 313 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 RAP1GAPP47736 663 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 CDH8P55286 799 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 NOP14P78316 857 aaKnown RBP17.72■□□□□ 0.43
PKP3-209ENST00000533069 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
PKP3-209ENST00000533069 KRT39Q6A163 491 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 UNC93AQ86WB7 457 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 MAB21L3Q8N8X9 362 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 BPIFB1Q8TDL5 484 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 CSGALNACT1Q8TDX6 532 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 ATOH1Q92858 354 aaPredicted RBP17.72■□□□□ 0.43
PKP3-209ENST00000533069 ERCC4Q92889 916 aaPredicted RBP17.72■□□□□ 0.43
PKP3-209ENST00000533069 BCO2Q9BYV7 579 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 SDCBP2Q9H190 292 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 THG1LQ9NWX6 298 aaKnown RBP17.72■□□□□ 0.43
PKP3-209ENST00000533069 PIAS3Q9Y6X2 628 aa17.72■□□□□ 0.43
PKP3-209ENST00000533069 FAM170BA6NMN3 283 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 F8VP50 259 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 NCAM2O15394 837 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 TADA3O75528 432 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 CAVIN2O95810 425 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 DCNP07585 359 aaKnown RBP17.71■□□□□ 0.43
PKP3-209ENST00000533069 PDE6CP51160 858 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 ANGPT1Q15389 498 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 ZSCAN23Q3MJ62 389 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 TXNDC8Q6A555 127 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 TRIML1Q8N9V2 468 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 TAS1R2Q8TE23 839 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 DHTKD1Q96HY7 919 aaPredicted RBP17.71■□□□□ 0.43
PKP3-209ENST00000533069 FAXDC2Q96IV6 333 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 TTLL2Q9BWV7 592 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 B3GNT5Q9BYG0 378 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 ZNF518BQ9C0D4 1074 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 NIF3L1Q9GZT8 377 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 CYP3A43Q9HB55 503 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 KIAA1468Q9P260 1216 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 MAN1B1Q9UKM7 699 aa17.71■□□□□ 0.43
PKP3-209ENST00000533069 TRAV19A0A0A6YYK7 116 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 PFKLP17858 780 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 CCNE1P24864 410 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 PPP3CCP48454 512 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 MXI1P50539 228 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 INCA1Q0VD86 236 aa17.7■□□□□ 0.42
PKP3-209ENST00000533069 ANKRD40Q6AI12 368 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms