RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 SYN2Q92777 582 aaPredicted RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 RMDN2Q96LZ7 410 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 GAS2L1Q99501 681 aaPredicted RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 SYT15Q9BQS2 421 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 MTMR12Q9C0I1 747 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 ATXN3LQ9H3M9 355 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 A0A1W2PQJ5 194 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 TARSL2A2RTX5 802 aaKnown RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 PRR23AA6NEV1 266 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 PRMT2P55345 433 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 MRPS15P82914 257 aaKnown RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 RUBCNQ92622 972 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 WNK4Q96J92 1243 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 C1QTNF7Q9BXJ2 289 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 NDEL1Q9GZM8 345 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 KCNQ5Q9NR82 932 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 FOXN1O15353 648 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 KRT16P08779 473 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 PPM1AP35813 382 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 PPP3CCP48454 512 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 RHOAP61586 193 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 IRX1P78414 480 aaPredicted RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 CENPCQ03188 943 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 USP10Q14694 798 aaKnown RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 SLC20A1Q8WUM9 679 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 NFKBIZQ9BYH8 718 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 ECT2Q9H8V3 914 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 ZC3H7BQ9UGR2 993 aaKnown RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 SLC39A10Q9ULF5 831 aa11.16□□□□□ -0.62
COLCA1-203ENST00000532918 COPG1Q9Y678 874 aaKnown RBP11.16□□□□□ -0.62
COLCA1-203ENST00000532918 DEPDC5O75140 1603 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 POMCP01189 267 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 PTGER2P43116 358 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 SGCGQ13326 291 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 TP53BP2Q13625 1128 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 FAM133BQ5BKY9 247 aaKnown RBP11.15□□□□□ -0.62
COLCA1-203ENST00000532918 NUGGCQ68CJ6 796 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 WDR18Q9BV38 432 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 DDX28Q9NUL7 540 aaKnown RBP11.15□□□□□ -0.62
COLCA1-203ENST00000532918 TRIM66O15016 1216 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 TEX33O43247 280 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 ITIH2P19823 946 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 AMHR2Q16671 573 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 MDH1BQ5I0G3 518 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 MRNIPQ6NTE8 343 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 ZNF438Q7Z4V0 828 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 TMCO5AQ8N6Q1 288 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 PRPF18Q99633 342 aaKnown RBP11.15□□□□□ -0.62
COLCA1-203ENST00000532918 MAN1C1Q9NR34 630 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 DDX43Q9NXZ2 648 aaKnown RBP11.15□□□□□ -0.62
COLCA1-203ENST00000532918 INTUQ9ULD6 942 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 FHOD1Q9Y613 1164 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 NFASCO94856 1347 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 A0A0G2JND7 137 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 PHF2O75151 1096 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 ATP5HO75947 161 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 CHRM3P20309 590 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 HDAC4P56524 1084 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 HIBCHQ6NVY1 386 aaPredicted RBP11.15□□□□□ -0.62
COLCA1-203ENST00000532918 TMEM86AQ8N2M4 240 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 SPATA18Q8TC71 538 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 SH3GL2Q99962 352 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 PARD6BQ9BYG5 372 aa11.15□□□□□ -0.62
COLCA1-203ENST00000532918 TAF1DQ9H5J8 278 aaPredicted RBP11.15□□□□□ -0.62
COLCA1-203ENST00000532918 MED24O75448 989 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 ITGALP20701 1170 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 ADCYAP1R1P41586 468 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 BYSLQ13895 437 aaKnown RBP11.15□□□□□ -0.63
COLCA1-203ENST00000532918 KLHDC7AQ5VTJ3 777 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 ADGRE3Q9BY15 652 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 ELOVL4Q9GZR5 314 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.63
COLCA1-203ENST00000532918 GOLPH3Q9H4A6 298 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 POLE3Q9NRF9 147 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 C20orf96Q9NUD7 363 aaPredicted RBP11.15□□□□□ -0.63
COLCA1-203ENST00000532918 SNTG2Q9NY99 539 aa11.15□□□□□ -0.63
COLCA1-203ENST00000532918 LSM8O95777 96 aaKnown RBP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 HPCAP84074 193 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 ILF2Q12905 390 aaKnown RBP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 SPDYAQ5MJ70 313 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 ACAD10Q6JQN1 1059 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 SLFN11Q7Z7L1 901 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 C1orf131Q8NDD1 294 aaKnown RBP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 SPIRE2Q8WWL2 714 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 GFM2Q969S9 779 aaKnown RBP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 PI4K2AQ9BTU6 479 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 XPO7Q9UIA9 1087 aaKnown RBP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 ADGRG1Q9Y653 693 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 RHOBTB1O94844 696 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 PARNO95453 639 aaKnown RBP11.14□□□□□ -0.63
COLCA1-203ENST00000532918 KRT75O95678 551 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 HMGCRP04035 888 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 LGALS2P05162 132 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 GRK3P35626 688 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 ZPBP2Q6X784 338 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 SLC30A10Q6XR72 485 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 GPR142Q7Z601 462 aa11.14□□□□□ -0.63
COLCA1-203ENST00000532918 ANKRD23Q86SG2 305 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms