RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 DDX23Q9BUQ8 820 aaKnown RBP20.23■□□□□ 0.83
UBXN1-211ENST00000531056 TRMT61BQ9BVS5 477 aaKnown RBP20.23■□□□□ 0.83
UBXN1-211ENST00000531056 SLC46A2Q9BY10 475 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 B3GNT5Q9BYG0 378 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 IMPG2Q9BZV3 1241 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 TMEM30AQ9NV96 361 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 HMGXB4Q9UGU5 601 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 ZMYM5Q9UJ78 669 aa20.23■□□□□ 0.83
UBXN1-211ENST00000531056 TRIM66O15016 1216 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 LRRN2O75325 713 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 PRAMEF12O95522 483 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 DDX6P26196 483 aaKnown RBP eCLIP20.22■□□□□ 0.83
UBXN1-211ENST00000531056 GRIK1P39086 918 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 PLA2G5P39877 138 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 MXI1P50539 228 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 CACNA2D1P54289 1103 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 PRKCQQ04759 706 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 TCF15Q12870 199 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 TTI2Q6NXR4 508 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 FOXR2Q6PJQ5 311 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 SEMA4DQ92854 862 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 TNIP3Q96KP6 325 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 C8orf48Q96LL4 319 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 LRRC3BQ96PB8 259 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 DUSP9Q99956 384 aaKnown RBP20.22■□□□□ 0.83
UBXN1-211ENST00000531056 ZNF518BQ9C0D4 1074 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 ELOVL4Q9GZR5 314 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.22■□□□□ 0.832e-8■■■■■ 37.3
UBXN1-211ENST00000531056 OBP2AQ9NY56 170 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 WDFY4Q6ZS81 3184 aa20.22■□□□□ 0.83
UBXN1-211ENST00000531056 ZNF638Q14966 1978 aaKnown RBP20.22■□□□□ 0.83
UBXN1-211ENST00000531056 MIA3Q5JRA6 1907 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 SOBPA7XYQ1 873 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 F8VP50 259 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 ARNTLO00327 626 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 BIN1O00499 593 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 CLDN5O00501 218 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 STX10O60499 249 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 GDI1P31150 447 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 NDST1P52848 882 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 FCHO2Q0JRZ9 810 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 INCA1Q0VD86 236 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 CLEC17AQ6ZS10 378 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 UNC93AQ86WB7 457 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 GPIHBP1Q8IV16 184 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 CMTM8Q8IZV2 173 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 SHDQ96IW2 340 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 NIF3L1Q9GZT8 377 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 BRD9Q9H8M2 597 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 TRPV5Q9NQA5 729 aa20.21■□□□□ 0.83
UBXN1-211ENST00000531056 PATJQ8NI35 1801 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 HELZP42694 1942 aaKnown RBP20.2■□□□□ 0.82
UBXN1-211ENST00000531056 SHISA7A6NL88 538 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 GALR2O43603 387 aaPredicted RBP20.2■□□□□ 0.82
UBXN1-211ENST00000531056 ANXA13P27216 316 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 USP46P62068 366 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 CBWD6Q4V339 395 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 DCAF17Q5H9S7 520 aaPredicted RBP20.2■□□□□ 0.82
UBXN1-211ENST00000531056 CBWD3Q5JTY5 395 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 CBWD5Q5RIA9 395 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 TXNDC8Q6A555 127 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 KLHL10Q6JEL2 608 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 DENND5BQ6ZUT9 1274 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 PAQR9Q6ZVX9 377 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 ACOT1Q86TX2 421 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 FAM35AQ86V20 835 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 MON1AQ86VX9 555 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 CRYBG2Q8N1P7 616 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 MAB21L3Q8N8X9 362 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 FBXL13Q8NEE6 735 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 NELFBQ8WX92 580 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 MRPS31Q92665 395 aaKnown RBP20.2■□□□□ 0.82
UBXN1-211ENST00000531056 IRF7Q92985 503 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 SLC35C1Q96A29 364 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 CEP63Q96MT8 703 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 TTLL2Q9BWV7 592 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 FOXQ1Q9C009 403 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 CYP3A43Q9HB55 503 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 HEBP1Q9NRV9 189 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 CTNND2Q9UQB3 1225 aa20.2■□□□□ 0.82
UBXN1-211ENST00000531056 KANSL1LA0AUZ9 987 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 STK25O00506 426 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 RFX1P22670 979 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 PTPN5P54829 565 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 ORC1Q13415 861 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 CAMK4Q16566 473 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 TCERG1LQ5VWI1 586 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 FILIP1Q7Z7B0 1213 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 CCDC105Q8IYK2 499 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 TRIML1Q8N9V2 468 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 PJA1Q8NG27 643 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 FAM122AQ96E09 287 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 TWNKQ96RR1 684 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 SMG9Q9H0W8 520 aaKnown RBP20.19■□□□□ 0.82
UBXN1-211ENST00000531056 RAB20Q9NX57 234 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 DLGAP2Q9P1A6 1054 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 KIAA1468Q9P260 1216 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 ARMCX3Q9UH62 379 aaPredicted RBP20.19■□□□□ 0.82
UBXN1-211ENST00000531056 COQ4Q9Y3A0 265 aa20.19■□□□□ 0.82
UBXN1-211ENST00000531056 ATP8B3O60423 1300 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms