RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 FAM83AQ86UY5 434 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 GAS2L3Q86XJ1 694 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 OR8H2Q8N162 312 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 KLHL36Q8N4N3 616 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 GPATCH11Q8N954 259 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 USP38Q8NB14 1042 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 PDPRQ8NCN5 879 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 SIMC1Q8NDZ2 872 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 TMIEQ8NEW7 156 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 SCAMP5Q8TAC9 235 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 CPT1CQ8TCG5 803 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 CSGALNACT1Q8TDX6 532 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 HMGB4Q8WW32 186 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 RFFLQ8WZ73 363 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 HERVK_113Q902F9 699 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 ST8SIA4Q92187 359 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 CFHR4Q92496 578 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 AJUBAQ96IF1 538 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 PHACTR3Q96KR7 559 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 C7orf26Q96N11 449 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 SLC46A1Q96NT5 459 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 NOX5Q96PH1 765 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 DIRC2Q96SL1 478 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 CPPED1Q9BRF8 314 aaPredicted RBP2.36□□□□□ -2.03
FGFR1-235ENST00000530701 TTPALQ9BTX7 342 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 LSM14BQ9BX40 385 aaKnown RBP2.36□□□□□ -2.03
FGFR1-235ENST00000530701 PAIP1Q9H074 479 aaKnown RBP2.36□□□□□ -2.03
FGFR1-235ENST00000530701 CCDC68Q9H2F9 335 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 SERHL2Q9H4I8 314 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 NSUN3Q9H649 340 aaKnown RBP2.36□□□□□ -2.03
FGFR1-235ENST00000530701 CHODLQ9H9P2 273 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 HAUS2Q9NVX0 235 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 NSMCE4AQ9NXX6 385 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 FAM53CQ9NYF3 392 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 ORC3Q9UBD5 711 aaPredicted RBP2.36□□□□□ -2.03
FGFR1-235ENST00000530701 PI4KBQ9UBF8 816 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 DNAJB11Q9UBS4 358 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 HESX1Q9UBX0 185 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 MBD1Q9UIS9 605 aaPredicted RBP2.36□□□□□ -2.03
FGFR1-235ENST00000530701 TBX20Q9UMR3 447 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 SLC45A2Q9UMX9 530 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 SCAF8Q9UPN6 1271 aaKnown RBP2.36□□□□□ -2.03
FGFR1-235ENST00000530701 CDYLQ9Y232 598 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 ATP11BQ9Y2G3 1177 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 TBC1D30Q9Y2I9 924 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 DERAQ9Y315 318 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 DTNAQ9Y4J8 743 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 IRAK3Q9Y616 596 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 RAD54BQ9Y620 910 aa2.36□□□□□ -2.03
FGFR1-235ENST00000530701 KAT6AQ92794 2004 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 A0A087WZ62 844 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 A0A0U1RQG5 324 aaPredicted RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 A0A1W2PPH5 198 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 B9A039 149 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 H0Y3Z8 333 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 J3KTA2 159 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 SEPT4O43236 478 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 HOXA3O43365 443 aaPredicted RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ORC4O43929 436 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 TMCC2O75069 709 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 PPP6R2O75170 966 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 GUCY1B2O75343 617 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ERN1O75460 977 aaKnown RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 IPO13O94829 963 aaKnown RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 LARGE1O95461 756 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 NTSR2O95665 410 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 IGHA1P01876 353 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 PROCP04070 461 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 HLA-DOAP06340 250 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ANXA6P08133 673 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 SLC3A2P08195 630 aaKnown RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ZNF888P0CJ79 500 aaPredicted RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 HSPA1AP0DMV8 641 aaKnown RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 HSPA1BP0DMV9 641 aaKnown RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 CKBP12277 381 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 CPA1P15085 419 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ZNF28P17035 718 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 CHRM3P20309 590 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 IGFBP6P24592 240 aaPredicted RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 SERPINA4P29622 427 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 COPB2P35606 906 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 KRT20P35900 424 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ARL3P36405 182 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 PGM1P36871 562 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 POLD2P49005 469 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 TUBP50607 506 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 EPHB3P54753 998 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 DRG2P55039 364 aaKnown RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 CASP6P55212 293 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 RAC3P60763 192 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 CALD1Q05682 793 aaKnown RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 RNASELQ05823 741 aaKnown RBP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.35□□□□□ -2.03
FGFR1-235ENST00000530701 GOLGA8FQ08AF8 430 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 DUSP8Q13202 625 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ATP1A4Q13733 1029 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ACAP1Q15027 740 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 ZNF827Q17R98 1081 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 BMT2Q1RMZ1 405 aa2.35□□□□□ -2.03
FGFR1-235ENST00000530701 BTBD16Q32M84 506 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms