RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 PTP4A2Q12974 167 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 RPS6KA1Q15418 735 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 LIN9Q5TKA1 542 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 FAM171A1Q5VUB5 890 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 WSCD1Q658N2 575 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 LLGL2Q6P1M3 1020 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 TAS1R1Q7RTX1 841 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 UNC93AQ86WB7 457 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 PDCL2Q8N4E4 241 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 WDTC1Q8N5D0 677 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 CEP112Q8N8E3 955 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 KBTBD7Q8WVZ9 684 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 C11orf84Q9BUA3 381 aaPredicted RBP15.24■□□□□ 0.03
TTC39A-216ENST00000530004 LHX5Q9H2C1 402 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 ABCB6Q9NP58 842 aa15.24■□□□□ 0.03
TTC39A-216ENST00000530004 TIMM13Q9Y5L4 95 aaPredicted RBP15.24■□□□□ 0.03
TTC39A-216ENST00000530004 ARHGEF37A1IGU5 675 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 A8MXQ7 604 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 O00370 1275 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 SOD2P04179 222 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 CYP11A1P05108 521 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 TYMPP19971 482 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 FGFR3P22607 806 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 TKTP29401 623 aaKnown RBP15.23■□□□□ 0.03
TTC39A-216ENST00000530004 CNGA2Q16280 664 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 C11orf63Q6NUN7 778 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 ACOT1Q86TX2 421 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 NT5DC3Q86UY8 548 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 C12orf29Q8N999 325 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 COG1Q8WTW3 980 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 CERS4Q9HA82 394 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 CHST7Q9NS84 486 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 STK39Q9UEW8 545 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.23■□□□□ 0.03
TTC39A-216ENST00000530004 AMFRQ9UKV5 643 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.23■□□□□ 0.03
TTC39A-216ENST00000530004 STXBP5LQ9Y2K9 1186 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 V9GYY5 206 aaPredicted RBP15.23■□□□□ 0.03
TTC39A-216ENST00000530004 GBF1Q92538 1859 aa15.23■□□□□ 0.03
TTC39A-216ENST00000530004 TMEM110-MUSTN1A8MSY1 372 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 M0QYV0 167 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 FAM163BP0C2L3 166 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 GNL1P36915 607 aaPredicted RBP15.22■□□□□ 0.03
TTC39A-216ENST00000530004 MESDQ14696 234 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 USP41Q3LFD5 358 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 RTP2Q5QGT7 225 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 CEP57Q86XR8 500 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 ADGRF2Q8IZF7 708 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 VPS52Q8N1B4 723 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 TMEM86AQ8N2M4 240 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 FBXO22Q8NEZ5 403 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 SPPL3Q8TCT6 385 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 TSC1Q92574 1164 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 BTBD6Q96KE9 485 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 B3GALT6Q96L58 329 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 TTPALQ9BTX7 342 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 SNX25Q9H3E2 840 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 ALG13Q9NP73 1137 aaKnown RBP15.22■□□□□ 0.03
TTC39A-216ENST00000530004 DSEQ9UL01 958 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 LZTS1Q9Y250 596 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 LAMA2P24043 3122 aaKnown RBP15.22■□□□□ 0.03
TTC39A-216ENST00000530004 KIAA1671Q9BY89 1806 aa15.22■□□□□ 0.03
TTC39A-216ENST00000530004 H3BNC9 293 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 GABRDO14764 452 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 HCRTO43612 131 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 TADA3O75528 432 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 CALB1P05937 261 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 YWHAHQ04917 246 aaPredicted RBP15.21■□□□□ 0.03
TTC39A-216ENST00000530004 ERICH1Q86X53 443 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 SPATA18Q8TC71 538 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 HERC2P3Q9BVR0 1158 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 DPEP3Q9H4B8 488 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 ANAPC7Q9UJX3 599 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 TSPAN16Q9UKR8 245 aa15.21■□□□□ 0.03
TTC39A-216ENST00000530004 EFCAB8A8MWE9 144 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 OAZ2O95190 189 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 PDGFRBP09619 1106 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.02
TTC39A-216ENST00000530004 LMO2P25791 158 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 UBE3AQ05086 875 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 CKAP4Q07065 602 aaKnown RBP15.21■□□□□ 0.02
TTC39A-216ENST00000530004 MRPL58Q14197 206 aaKnown RBP15.21■□□□□ 0.02
TTC39A-216ENST00000530004 NAA30Q147X3 362 aaPredicted RBP15.21■□□□□ 0.02
TTC39A-216ENST00000530004 STILQ15468 1287 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 GOLGA7BQ2TAP0 167 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 VARS2Q5ST30 1063 aaKnown RBP15.21■□□□□ 0.02
TTC39A-216ENST00000530004 OVOS1Q6IE37 1185 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 PLEKHA7Q6IQ23 1121 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 LCLAT1Q6UWP7 414 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 OSTM1Q86WC4 334 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 METTL23Q86XA0 190 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 CREG2Q8IUH2 290 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 UBA3Q8TBC4 463 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 POF1BQ8WVV4 589 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 ARNTL2Q8WYA1 636 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.02
TTC39A-216ENST00000530004 PARVAQ9NVD7 372 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 CYTH4Q9UIA0 394 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 ALG6Q9Y672 507 aa15.21■□□□□ 0.02
TTC39A-216ENST00000530004 SCINQ9Y6U3 715 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms