RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 UBXN11Q5T124 520 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 KRT40Q6A162 431 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 LIMS2Q7Z4I7 341 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 GPR142Q7Z601 462 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 PLEKHH3Q7Z736 793 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 ADGRA1Q86SQ6 560 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 FTSJ3Q8IY81 847 aaKnown RBP6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 C12orf42Q96LP6 360 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 LMF1Q96S06 567 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 GPHA2Q96T91 129 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 SLC13A1Q9BZW2 595 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 PIH1D3Q9NQM4 214 aaKnown RBP6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 TLR9Q9NR96 1032 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 PUF60Q9UHX1 559 aaKnown RBP6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 TNNQ9UQP3 1299 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 RABGAP1Q9Y3P9 1069 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 ATAD5Q96QE3 1844 aa6.03□□□□□ -1.44
AMBRA1-209ENST00000529963 CDC14BO60729 498 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 GSPT1P15170 499 aaKnown RBP6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 SYN1P17600 705 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 CTSSP25774 331 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 MAGEA10P43363 369 aaPredicted RBP6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 KIR2DL3P43628 341 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 DYNLL1P63167 89 aaKnown RBP6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 SHROOM1Q2M3G4 852 aaPredicted RBP6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 WDR78Q5VTH9 848 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 MFSD14CQ5VZR4 134 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 BTNL9Q6UXG8 535 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 FRMD5Q7Z6J6 570 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 ITPRIPQ8IWB1 547 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 UNC5BQ8IZJ1 945 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 RIN2Q8WYP3 895 aaPredicted RBP6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 USP6NLQ92738 828 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 FATE1Q969F0 183 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 MEGF9Q9H1U4 602 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 PORCNQ9H237 461 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 AGO3Q9H9G7 860 aaKnown RBP6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 PPP4R1LQ9P1A2 415 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 SERPINB13Q9UIV8 391 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 DBNLQ9UJU6 430 aaKnown RBP6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 SPEF1Q9Y4P9 236 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 SPTBN5Q9NRC6 3674 aaKnown RBP6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 VCANP13611 3396 aa6.02□□□□□ -1.45
AMBRA1-209ENST00000529963 SLC15A5A6NIM6 579 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 AKAP10O43572 662 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 AKR1B10O60218 316 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 ZRANB2O95218 330 aaKnown RBP eCLIP6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 VCAM1P19320 739 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 ADAM8P78325 824 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 PPP3CAQ08209 521 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 NFYCQ13952 458 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 NOMO1Q15155 1222 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 LRRC41Q15345 812 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 CCL14Q16627 93 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 CERKLQ49MI3 558 aaPredicted RBP6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 MUM1L1Q5H9M0 696 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 TATDN1Q6P1N9 297 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 CATSPERGQ6ZRH7 1159 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 TAX1BP1Q86VP1 789 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 ERC1Q8IUD2 1116 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 MAGEB6Q8N7X4 407 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 MIGA1Q8NAN2 632 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 FBXO18Q8NFZ0 1043 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 NRG4Q8WWG1 115 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 EDC3Q96F86 508 aaKnown RBP6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 TMEM176AQ96HP8 235 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 C20orf173Q96LM9 149 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 SLC6A15Q9H2J7 730 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 GEMIN8Q9NWZ8 242 aaKnown RBP6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 OAZ3Q9UMX2 235 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 SIPA1L1O43166 1804 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 PFASO15067 1338 aa6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 DDX60LQ5H9U9 1706 aaKnown RBP6.01□□□□□ -1.45
AMBRA1-209ENST00000529963 MUC6Q6W4X9 2439 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 CCDC194A0A1B0GVG4 234 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 LTA4HP09960 611 aaKnown RBP6□□□□□ -1.45
AMBRA1-209ENST00000529963 FOSL2P15408 326 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 CR2P20023 1033 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 CCND3P30281 292 aaPredicted RBP6□□□□□ -1.45
AMBRA1-209ENST00000529963 RECQLP46063 649 aaPredicted RBP6□□□□□ -1.45
AMBRA1-209ENST00000529963 EPHB4P54760 987 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 MALLQ13021 153 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 FZD5Q13467 585 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 TAS1R1Q7RTX1 841 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 AACSQ86V21 672 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 GPR135Q8IZ08 494 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 OR2I1PQ8NGU4 316 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 CDX2Q99626 313 aaPredicted RBP6□□□□□ -1.45
AMBRA1-209ENST00000529963 ADI1Q9BV57 179 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 ZIM2Q9NZV7 527 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 SCOCQ9UIL1 159 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 INTUQ9ULD6 942 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 ALPK3Q96L96 1907 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 PLXNB2O15031 1838 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 FOCADQ5VW36 1801 aa6□□□□□ -1.45
AMBRA1-209ENST00000529963 NPEPPSL1A6NEC2 478 aa5.99□□□□□ -1.45
AMBRA1-209ENST00000529963 ADCY6O43306 1168 aa5.99□□□□□ -1.45
AMBRA1-209ENST00000529963 SLC26A4O43511 780 aa5.99□□□□□ -1.45
AMBRA1-209ENST00000529963 CNMDO75829 334 aa5.99□□□□□ -1.45
AMBRA1-209ENST00000529963 HOXC6P09630 235 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms