RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 TMEM63CQ9P1W3 806 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 NUMBLQ9Y6R0 609 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 TRIOO75962 3097 aa13.48□□□□□ -0.25
CCDC90B-216ENST00000529856 ATP8B3O60423 1300 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 TRIM66O15016 1216 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 GPR37L1O60883 481 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 ANXA13P27216 316 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 CDC25CP30307 473 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 CACNA2D1P54289 1103 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 SIGLEC14Q08ET2 396 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 LRMPQ12912 555 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 CUL2Q13617 745 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 FAM78AQ5JUQ0 283 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 TRIM67Q6ZTA4 783 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 TMEM150AQ86TG1 271 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 FAM114A1Q8IWE2 563 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 C12orf29Q8N999 325 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 ENOX1Q8TC92 643 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 SMARCD2Q92925 531 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 TRMT2BQ96GJ1 504 aaKnown RBP13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 ASB16Q96NS5 453 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 ARID3AQ99856 593 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 MED10Q9BTT4 135 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 DNAI2Q9GZS0 605 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 C11orf16Q9NQ32 467 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 TMEM30AQ9NV96 361 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 UXTQ9UBK9 157 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 MAGED2Q9UNF1 606 aaPredicted RBP13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 GREB1Q4ZG55 1949 aa13.47□□□□□ -0.25
CCDC90B-216ENST00000529856 F8VP50 259 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 ECI2O75521 394 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 TRIM21P19474 475 aaKnown RBP13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 TBXAS1P24557 533 aaPredicted RBP13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 MTIF2P46199 727 aaKnown RBP13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 ARHGAP15Q53QZ3 475 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 STXBP5Q5T5C0 1151 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 TANGO2Q6ICL3 276 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 DENND5BQ6ZUT9 1274 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 FAM35AQ86V20 835 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 ZSCAN18Q8TBC5 510 aaPredicted RBP13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 SLC2A14Q8TDB8 520 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 ELSPBP1Q96BH3 223 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 CYFIP2Q96F07 1278 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 TMEM176AQ96HP8 235 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 NT5C1BQ96P26 610 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 GCNAQ96QF7 691 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 KCNK16Q96T55 309 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 HNRNPABQ99729 332 aaKnown RBP13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 SLITRK6Q9H5Y7 841 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 TASP1Q9H6P5 420 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 TRPV4Q9HBA0 871 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 ZFP14Q9HCL3 533 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 ANO10Q9NW15 660 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 DUSP12Q9UNI6 340 aa13.46□□□□□ -0.25
CCDC90B-216ENST00000529856 TECTAO75443 2155 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 DENND4CQ5VZ89 1909 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 FAM86C2PA6NEL3 165 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 SOBPA7XYQ1 873 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 NARSO43776 548 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 AP1G2O75843 785 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 CCDC130P13994 396 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 FCARP24071 287 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 WEE1P30291 646 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 RAD23BP54727 409 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 YWHAEP62258 255 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 CYP4F8P98187 520 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 STX1AQ16623 288 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 ZNF394Q53GI3 561 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 TMEM31Q5JXX7 168 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 GPR158Q5T848 1215 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 UBR7Q8N806 425 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 SLC4A11Q8NBS3 891 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 ASIC4Q96FT7 647 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 SMARCD1Q96GM5 515 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 HEXIM2Q96MH2 286 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 SMOQ99835 787 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 KXD1Q9BQD3 176 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 TTLL2Q9BWV7 592 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 SLC46A2Q9BY10 475 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 PLA2G2FQ9BZM2 168 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 INTS2Q9H0H0 1204 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 SAMSN1Q9NSI8 373 aaKnown RBP13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 FAM49BQ9NUQ9 324 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 ZMYM5Q9UJ78 669 aa13.45□□□□□ -0.26
CCDC90B-216ENST00000529856 TMEM221A6NGB7 291 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 M0R296 226 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 BEST1O76090 585 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 SRFP11831 508 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 USP46P62068 366 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 MAN2A1Q16706 1144 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 HSP90AA4PQ58FG1 418 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 CAVIN1Q6NZI2 390 aaKnown RBP13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 C11orf57Q6ZUT1 292 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 BMP8AQ7Z5Y6 402 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 ARID3BQ8IVW6 561 aaPredicted RBP13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 NUP93Q8N1F7 819 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 ZMIZ2Q8NF64 920 aa13.44□□□□□ -0.26
CCDC90B-216ENST00000529856 MRPS31Q92665 395 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms